RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TBC1D4O60343 1298 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 ITGA4P13612 1032 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 ST13P50502 369 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 MCL1Q07820 350 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 C11orf63Q6NUN7 778 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 NOTUMQ6P988 496 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 SPATA17Q96L03 361 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 CGRRF1Q99675 332 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 F8VZ95 297 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 PTK6Q13882 451 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 PDK2Q15119 407 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 SMTNL2Q2TAL5 461 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 DEPDC1Q5TB30 811 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 DCP1BQ8IZD4 617 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 TMEM39BQ9GZU3 492 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 FAM49BQ9NUQ9 324 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.131e-7■□□□□ 11.2
SMARCA4-202ENST00000413806 PCDHGB4Q9UN71 923 aa14.27□□□□□ -0.13
SMARCA4-202ENST00000413806 OGTO15294 1046 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 HSPA1AP0DMV8 641 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 HSPA1BP0DMV9 641 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 CYP4A22Q5TCH4 519 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 UBA3Q8TBC4 463 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ADAM33Q9BZ11 813 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 AP4S1Q9Y587 144 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 GRAP2O75791 330 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 PYGLP06737 847 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 CHI3L2Q15782 390 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 EPC2Q52LR7 807 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 PRPF39Q86UA1 669 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 CAAP1Q9H8G2 361 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 O00370 1275 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 AP5Z1O43299 807 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 LSM8O95777 96 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 MMP14P50281 582 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 HDDC2Q7Z4H3 204 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 USP33Q8TEY7 942 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 DCUN1D1Q96GG9 259 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 FAM205AQ6ZU69 1335 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 NFIBO00712 420 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 NDUFS3O75489 264 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ENO3P13929 434 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 MPP4Q96JB8 637 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ARHGAP20Q9P2F6 1191 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 ITGB1BP2Q9UKP3 347 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 DUSP10Q9Y6W6 482 aa14.26□□□□□ -0.13
SMARCA4-202ENST00000413806 RARBP10826 455 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 CAP2P40123 477 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TAF6P49848 677 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ANGEL2Q5VTE6 544 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ZNF720Q7Z2F6 126 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 SZRD1Q7Z422 152 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TRPC5OSA6NMA1 111 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 VDRP11473 427 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TARSP26639 723 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TFDP3Q5H9I0 405 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 MDM1Q8TC05 714 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 AFF4Q9UHB7 1163 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 DTNAQ9Y4J8 743 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TRIM49D1C9J1S8 452 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 LZTS3O60299 673 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 PTGER2P43116 358 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ZNF571Q7Z3V5 609 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ZMYND8Q9ULU4 1186 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 GLRA3O75311 464 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 CYBBP04839 570 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ITGB3P05106 788 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 TBX2Q13207 712 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 DGKDQ16760 1214 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 DCAF6Q58WW2 860 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 CBWD2Q8IUF1 395 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 EXD1Q8NHP7 514 aa14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 EPS8L3Q8TE67 593 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-202ENST00000413806 ANKRD27Q96NW4 1050 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms