RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ATP2C2O75185 946 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 RBP5P82980 135 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PDIA2Q13087 525 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 TAPT1Q6NXT6 567 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 GTF3C2Q8WUA4 911 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 CPB2Q96IY4 423 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 MAGEB18Q96M61 343 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 ADPGKQ9BRR6 497 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PHACTR1Q9C0D0 580 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 MIS12Q9H081 205 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 MLXIPLQ9NP71 852 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 FGFR1OP2Q9NVK5 253 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 HMGXB4Q9UGU5 601 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PCSK1NQ9UHG2 260 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 ITGA11Q9UKX5 1188 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 BARX2Q9UMQ3 279 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 C2CD2Q9Y426 696 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 COL1A2P08123 1366 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 FAM47DPA6NHR8 397 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SMAPO00193 183 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SUN1O94901 812 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 GSTA1P08263 222 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 MIPP30301 263 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SNAPC2Q13487 334 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 HIF1AQ16665 826 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 NT5DC4Q86YG4 428 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 SAE1Q9UBE0 346 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 USP18Q9UMW8 372 aa12.05□□□□□ -0.48
TRAFD1-202ENST00000412615 POC1B-GALNT4F8VUJ3 575 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RASSF9O75901 435 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 DNAJC8O75937 253 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 STAU1O95793 577 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 TRUB2O95900 331 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 VTNP04004 478 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 PCK1P35558 622 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CCNA1P78396 465 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 IL9RQ01113 521 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 FASTKD3Q14CZ7 662 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RASA2Q15283 850 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 GJC2Q5T442 439 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 USP50Q70EL3 339 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 TRABD2AQ86V40 505 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RFX6Q8HWS3 928 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 GDAP1Q8TB36 358 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ACAP3Q96P50 834 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 TGS1Q96RS0 853 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 PLCD4Q9BRC7 762 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 SLC40A1Q9NP59 571 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 SLC24A2Q9UI40 661 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ANK1P16157 1881 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 OAS1P00973 400 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 APOC2P02655 101 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CD48P09326 243 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 GCAP28676 217 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 PHBP35232 272 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ZNF143P52747 638 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 SLC18A1P54219 525 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ARL4CP56559 192 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 INCA1Q0VD86 236 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 SF3A3Q12874 501 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 XRCC4Q13426 336 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CNPY3Q9BT09 278 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 MAK16Q9BXY0 300 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 KLC4Q9NSK0 619 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 DPP3Q9NY33 737 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 MCF2LO15068 1137 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CYP2C8P10632 490 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 KRT15P19012 456 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 GPD1P21695 349 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 RPL22P35268 128 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 NDST1P52848 882 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 EIF3EP60228 445 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 DPH6Q7L8W6 267 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 PYROXD1Q8WU10 500 aa12.04□□□□□ -0.48
TRAFD1-202ENST00000412615 CPT1BQ92523 772 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms