RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 IGHV1OR15-9A0A0B4J2B8 117 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 A0A1B0GTW7 788 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TTC26A0AVF1 554 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TBC1D3BA6NDS4 549 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ANTXRLA6NF34 631 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 FAM205CA6NFA0 338 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CYSRT1A8MQ03 144 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 LACTBL1A8MY62 500 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TDRD15B5MCY1 1934 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PIRO00625 290 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CYB561D2O14569 222 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ABLIM1O14639 778 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SLC9A3R1O14745 358 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SLC16A4O15374 487 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 FLRT2O43155 660 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGAP6O43182 974 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TNFSF14O43557 240 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KALRNO60229 2985 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 HIP1RO75146 1068 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NDUFS2O75306 463 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CDC45O75419 566 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KAT7O95251 611 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CER1O95813 267 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ADH1CP00326 375 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 COL4A2P08572 1712 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NFICP08651 508 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 OR52Z1P0C646 297 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ATXN1LP0C7T5 689 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF883P0CG24 379 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 HLA-EP13747 358 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 HOXB2P14652 356 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PFKLP17858 780 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 LAMA1P25391 3075 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ITPKBP27987 946 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KRT2P35908 639 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CCT6AP40227 531 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 EIF2DP41214 584 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 MATR3P43243 847 aaKnown RBP eCLIP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TNFRSF4P43489 277 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KIR2DL1P43626 348 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NPTX2P47972 431 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SLC6A11P48066 632 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TAF6P49848 677 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CDR1P51861 262 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SMTNP53814 917 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TSPY1Q01534 308 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CFHR1Q03591 330 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KCNC4Q03721 635 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SPAG1Q07617 926 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 MCL1Q07820 350 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SCRN1Q12765 414 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 GRIK2Q13002 908 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 USP4Q13107 963 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 RESTQ13127 1097 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 STK3Q13188 491 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NR5A1Q13285 461 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CAMK2BQ13554 666 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TOB2Q14106 344 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ITPR1Q14643 2758 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NOLC1Q14978 699 aaKnown RBP eCLIP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SUZ12Q15022 739 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 DHCR24Q15392 516 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SMAD1Q15797 465 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF77Q15935 545 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 DDR2Q16832 855 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TAF1BQ53T94 588 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 EMC10Q5UCC4 262 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SDHAF4Q5VUM1 108 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SPATA1Q5VX52 437 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 WSCD1Q658N2 575 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SDE2Q6IQ49 451 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 IL27RAQ6UWB1 636 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 DBX2Q6ZNG2 339 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 RUFY3Q7L099 469 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TAS1R3Q7RTX0 852 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TICRRQ7Z2Z1 1910 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TRMT11Q7Z4G4 463 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 LRRTM3Q86VH5 581 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TMPRSS12Q86WS5 348 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SLC41A1Q8IVJ1 513 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CD302Q8IX05 232 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CFAP46Q8IYW2 2715 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ADGRG2Q8IZP9 1017 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF513Q8N8E2 541 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ARL14EPQ8N8R7 260 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ENGASEQ8NFI3 743 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KCNV2Q8TDN2 545 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 RHBDD1Q8TEB9 315 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SPIRE2Q8WWL2 714 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 BAP1Q92560 729 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 MYO18AQ92614 2054 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NXPE2Q96DL1 559 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 FAM212AQ96EL1 285 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 BICD1Q96G01 975 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TRMT2BQ96GJ1 504 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CRELD1Q96HD1 420 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF419Q96HQ0 510 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZBTB45Q96K62 511 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 MYRFLQ96LU7 910 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 HSPA12BQ96MM6 686 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms