RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ADAM17P78536 824 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 ARCQ7LC44 396 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 PHLDB2Q86SQ0 1253 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 TLK2Q86UE8 772 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-205ENST00000410093 USP6NLQ92738 828 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF560Q96MR9 790 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 CCDC77Q9BR77 488 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 EPN3Q9H201 632 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 GGA2Q9UJY4 613 aa14.28□□□□□ -0.12
LIMS1-205ENST00000410093 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 FAM170AA1A519 330 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 F8VP50 259 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 M0QYV0 167 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 RGS16O15492 202 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 NPTXRO95502 500 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ERBB2P04626 1255 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CYP2B6P20813 491 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 KLRC2P26717 231 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 RFC1P35251 1148 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 NDST1P52848 882 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CRYBB1P53674 252 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CDH8P55286 799 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 SLC25A11Q02978 314 aaKnown RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 SNX1Q13596 522 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 SLC29A2Q14542 456 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 XKR4Q5GH76 650 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 LLGL2Q6P1M3 1020 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 GSTA5Q7RTV2 222 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ALLCQ8N6M5 410 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CMASQ8NFW8 434 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 RNF25Q96BH1 459 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CPXM1Q96SM3 734 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CNPY3Q9BT09 278 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.12
LIMS1-205ENST00000410093 CENPHQ9H3R5 247 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 RSAD1Q9HA92 442 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 TRIP11Q15643 1979 aa14.27□□□□□ -0.12
LIMS1-205ENST00000410093 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
LIMS1-205ENST00000410093 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 EBAG9O00559 213 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 TTC4O95801 387 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ABHD2P08910 425 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 KCNE1P15382 129 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 LSP1P33241 339 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 RAP1GAPP47736 663 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ITGA8P53708 1063 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 OGDHQ02218 1023 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 MORF4L2Q15014 288 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 CYP4A22Q5TCH4 519 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 MFSD7Q6UXD7 560 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 BBS12Q6ZW61 710 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 DPH6Q7L8W6 267 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 RIBC1Q8N443 379 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ZCCHC9Q8N567 271 aaKnown RBP14.26□□□□□ -0.13
LIMS1-205ENST00000410093 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 BCAS4Q8TDM0 211 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 KAT2BQ92831 832 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 APBA2Q99767 749 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 HEMGNQ9BXL5 484 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 UNC93B1Q9H1C4 597 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 HESX1Q9UBX0 185 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 GJD2Q9UKL4 321 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
LIMS1-205ENST00000410093 ZNF148Q9UQR1 794 aa14.26□□□□□ -0.13
LIMS1-205ENST00000410093 DPYSL4O14531 572 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 RASGRF2O14827 1237 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 LRCH4O75427 683 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 GPD1P21695 349 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 KDELR1P24390 212 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 HOXC8P31273 242 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SSTR3P32745 418 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 GJA8P48165 433 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TFDP2Q14188 446 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TNFAIP8L3Q5GJ75 292 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 HIBCHQ6NVY1 386 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 MICALCLQ6ZW33 695 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SESTD1Q86VW0 696 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 MAP7D3Q8IWC1 876 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms