RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MIF4GDA9UHW6 222 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 HNRNPRO43390 633 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 ACSL4O60488 711 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TSC22D2O75157 780 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CPSF4O95639 269 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 STIP1P31948 543 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 KCNK10P57789 538 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 RCN1Q15293 331 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 SNX30Q5VWJ9 437 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 C11orf88Q6PI97 169 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MYCBPQ99417 103 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 DPP3Q9NY33 737 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 GYS1P13807 737 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CCNG1P51959 295 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 LPIN1Q14693 890 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 CASP8Q14790 479 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 MACC1Q6ZN28 852 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 NACC2Q96BF6 587 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 OMDQ99983 421 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 PI4K2AQ9BTU6 479 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 STMN3Q9NZ72 180 aa11.66□□□□□ -0.54
PRPF40A-202ENST00000410080 EIF2S1P05198 315 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CYP2C19P33261 490 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CSTF3Q12996 717 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CCT7Q99832 543 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 PARD6BQ9BYG5 372 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SCN3BQ9NY72 215 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SAE1Q9UBE0 346 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 OPLAHO14841 1288 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 TRIM13O60858 407 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 ITGB6P18564 788 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 ORC1Q13415 861 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 EMC2Q15006 297 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 POLG2Q9UHN1 485 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 PTK6Q13882 451 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 RABGAP1LQ5R372 815 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CYP4X1Q8N118 509 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 RPRD1AQ96P16 312 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 EMILIN2Q9BXX0 1053 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 POLBP06746 335 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 ACADSBP45954 432 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 TGM3Q08188 693 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SGSM1Q2NKQ1 1148 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 TBC1D16Q8TBP0 767 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SPRTNQ9H040 489 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CARD9Q9H257 536 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SLC9A8Q9Y2E8 581 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SIK3Q9Y2K2 1263 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CCDC188H7C350 402 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 GMPSP49915 693 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 CYP20A1Q6UW02 462 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 LRRC74BQ6ZQY2 392 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 DTX3LQ8TDB6 740 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 EME1Q96AY2 570 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 RNPEPQ9H4A4 650 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 MRPL39Q9NYK5 338 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
PRPF40A-202ENST00000410080 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 AP1G2O75843 785 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 CHGBP05060 677 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 PGM1P36871 562 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 CENPLQ8N0S6 344 aaPredicted RBP11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 CNBD2Q96M20 576 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 SENP6Q9GZR1 1112 aaPredicted RBP11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.55
PRPF40A-202ENST00000410080 A8MX80 341 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 C19orf81C9J6K1 198 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 PRMT3O60678 531 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 POU1F1P28069 291 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 TTC39BQ5VTQ0 682 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 RNF44Q7L0R7 432 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 DENND6AQ8IWF6 608 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 XPO6Q96QU8 1125 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 MSH3P20585 1137 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 TIGD7Q6NT04 549 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 FAM167BQ9BTA0 163 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF24P17028 368 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 GGCXP38435 758 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 CYP24A1Q07973 514 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 C16orf89Q6UX73 402 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms