RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 POLG2Q9UHN1 485 aa8.74□□□□□ -1.01
SCN9A-203ENST00000409672 KDM1AO60341 852 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TPST1O60507 370 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 CASP4P49662 377 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 AP2B1P63010 937 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 KIAA2013Q8IYS2 634 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SCFD2Q8WU76 684 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 CORO1BQ9BR76 489 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 GOLPH3LQ9H4A5 285 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 KLHL3Q9UH77 587 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 DYRK1BQ9Y463 629 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 NEO1Q92859 1461 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 MEI4A8MW99 385 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SCAMP1O15126 338 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 KLHL18O94889 574 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 E2F4Q16254 413 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SGSM1Q2NKQ1 1148 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 DDX42Q86XP3 938 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 HBP1O60381 514 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 IFNA16P05015 189 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 MSH3P20585 1137 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 C3orf62Q6ZUJ4 267 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 PTAR1Q7Z6K3 402 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TFB1MQ8WVM0 346 aaKnown RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 GPRASP2Q96D09 838 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SH3BP4Q9P0V3 963 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 VEGFAP15692 232 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TAF6P49848 677 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 C21orf59P57076 290 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 CYP51A1Q16850 503 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 WNT8AQ9H1J5 351 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 XPNPEP3Q9NQH7 507 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 KAT6AQ92794 2004 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TCP11X1B4DZS4 312 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 VWA5AO00534 786 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TRPC4APQ8TEL6 797 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 PRRG4Q9BZD6 226 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 ZDHHC6Q9H6R6 413 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 MIEF1Q9NQG6 463 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TNFSF13BQ9Y275 285 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 ERBB4Q15303 1308 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TLL1O43897 1013 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 ACSL4O60488 711 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 RTN2O75298 545 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 LPIN1Q14693 890 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 TPD52L3Q96J77 140 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 OVOS2A0A0G2JMS6 1433 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 OVOS2A0A0J9YW53 1432 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 OVOS2Q6IE36 1432 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 MAGEB2O15479 319 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SMNDC1O75940 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 LTFP02788 710 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 EIF3BP55884 814 aaKnown RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 CNGA3Q16281 694 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 SPATS2Q86XZ4 545 aaKnown RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-203ENST00000409672 GPATCH2LQ9NWQ4 482 aa8.73□□□□□ -1.01
SCN9A-203ENST00000409672 HLA-DRAP01903 254 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ACTN3Q08043 901 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GET4Q7L5D6 327 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 HERC6Q8IVU3 1022 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 OSBPL9Q96SU4 736 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CDYLQ9Y232 598 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 COQ6Q9Y2Z9 468 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MYPNQ86TC9 1320 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GSG1L2A8MUP6 293 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MT-CO1P00395 513 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RHOAP61586 193 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 XRCC4Q13426 336 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 PLPP4Q5VZY2 271 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RPAINQ86UA6 219 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MTERF3Q96E29 417 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 TUBB6Q9BUF5 446 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 TRPM5Q9NZQ8 1165 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MGAT4DA6NG13 374 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 SLC25A27O95847 323 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GPD1P21695 349 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 NFIL3Q16649 462 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 NLRP9Q7RTR0 991 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 TMEM60Q9H2L4 133 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 TUFT1Q9NNX1 390 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CACNA1FO60840 1977 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GON4LQ3T8J9 2241 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RGS12O14924 1447 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GGCXP38435 758 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RBBP4Q09028 425 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 AKIRIN2Q53H80 203 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MRPL1Q9BYD6 325 aaKnown RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 PHLPP2Q6ZVD8 1323 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ERI2A8K979 691 aaKnown RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 STXBP3O00186 592 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 POLBP06746 335 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 KLRC1P26715 233 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms