RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MAN1C1Q9NR34 630 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 NME7Q9Y5B8 376 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 ADAM12O43184 909 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 HCRTO43612 131 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 SERPING1P05155 500 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 CYP11B1P15538 503 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 PRKCIP41743 596 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 MTHFRP42898 656 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 PSMC1P62191 440 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 ZP2Q05996 745 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 KLHL30Q0D2K2 578 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 ORC1Q13415 861 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 FAM171BQ6P995 826 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 TMC5Q6UXY8 1006 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 IRF2BP2Q7Z5L9 587 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 KREMEN2Q8NCW0 462 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 RIPOR3Q96MK2 946 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 NECTIN4Q96NY8 510 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 PHF7Q9BWX1 381 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 CD320Q9NPF0 282 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 ATP8B3O60423 1300 aa17.52■□□□□ 0.4
TSPAN4-208ENST00000409531 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 THAP12O43422 761 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 GPR17Q13304 367 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 SLC39A12Q504Y0 691 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 MDH1BQ5I0G3 518 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 RSPO2Q6UXX9 243 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 GPR149Q86SP6 731 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 SLC47A2Q86VL8 602 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 VPS36Q86VN1 386 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 CMASQ8NFW8 434 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 EPS8L1Q8TE68 723 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 CYFIP2Q96F07 1278 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 CRTAC1Q9NQ79 661 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 GTF3C4Q9UKN8 822 aa17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 MTCL1Q9Y4B5 1905 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC195A0A1B0GUA6 201 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 MYBPHLA2RUH7 354 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 BDP1A6H8Y1 2624 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 ATP2C2O75185 946 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 ARPP19P56211 112 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 CDK17Q00537 523 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 CNGA2Q16280 664 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 MEA1Q16626 185 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 TDRD12Q587J7 1177 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 TPGS2Q68CL5 300 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 ZNF461Q8TAF7 563 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 SPPL2BQ8TCT7 592 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 ZNF606Q8WXB4 792 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 FUBP3Q96I24 572 aaKnown RBP eCLIP17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 TMEM209Q96SK2 561 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 PKMYT1Q99640 499 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 HNRNPABQ99729 332 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 RHOBTB2Q9BYZ6 727 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 FAM49BQ9NUQ9 324 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 ZDHHC7Q9NXF8 308 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 HESX1Q9UBX0 185 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 MAFFQ9ULX9 164 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 PCDHB5Q9Y5E4 795 aa17.5■□□□□ 0.39
TSPAN4-208ENST00000409531 NRDCO43847 1150 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 ZMYND10O75800 440 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PAPLNO95428 1278 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PTMAP06454 111 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 SLC8A3P57103 927 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 CDR2Q01850 454 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 ROR1Q01973 937 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 CYP27A1Q02318 531 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 E4F1Q66K89 784 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 NOP9Q86U38 636 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PCED1BQ96HM7 432 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 MED10Q9BTT4 135 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 ABCB6Q9NP58 842 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 CDH22Q9UJ99 828 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 NOCTQ9UK39 431 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 PCDHGC3Q9UN70 934 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 CEP83Q9Y592 693 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
TSPAN4-208ENST00000409531 WDR27A2RRH5 827 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 LOC730098B7Z3J9 87 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 O00370 1275 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 RFPL2O75678 378 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms