RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 EPHX2P34913 555 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 TMPRSS15P98073 1019 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 PRKCEQ02156 737 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 GAD2Q05329 585 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 TFDP1Q14186 410 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 KCTD21Q4G0X4 260 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 ZCCHC23Q6ZST2 131 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 RHPN2Q8IUC4 686 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 TMEM130Q8N3G9 435 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 PYROXD1Q8WU10 500 aa13.58□□□□□ -0.24
PTPRN-202ENST00000409251 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
PTPRN-202ENST00000409251 MAK16Q9BXY0 300 aaKnown RBP13.58□□□□□ -0.24
PTPRN-202ENST00000409251 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.24
PTPRN-202ENST00000409251 A0A0A6YYK5 440 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 LIN7AO14910 233 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 GSC2O15499 205 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ZMPSTE24O75844 475 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 GALK1P51570 392 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ASPHQ12797 758 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 MMEL1Q495T6 779 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 CDCA5Q96FF9 252 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 TMEM121Q9BTD3 319 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ASCC2Q9H1I8 757 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 SLC9A2Q9UBY0 812 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 PCYOX1Q9UHG3 505 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 EDF1O60869 148 aaKnown RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 MT-ND3P03897 115 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 NRLP54845 237 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ALCAMQ13740 583 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 OR52E8Q6IFG1 317 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 FAM213AQ9BRX8 229 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 NMUR2Q9GZQ4 415 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 WNT8AQ9H1J5 351 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 TAS2R1Q9NYW7 299 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 PRKAG3Q9UGI9 489 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 FOCADQ5VW36 1801 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 MAGEB3O15480 346 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 FGFR1P11362 822 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 PSMC5P62195 406 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 DSG1Q02413 1049 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 EML3Q32P44 896 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 TCHHL1Q5QJ38 904 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 GSTCDQ8NEC7 633 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 SHKBP1Q8TBC3 707 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 RIT2Q99578 217 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 EBF3Q9H4W6 596 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 AGTPBP1Q9UPW5 1226 aa13.57□□□□□ -0.24
PTPRN-202ENST00000409251 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
PTPRN-202ENST00000409251 FCHO1O14526 889 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 PPP3CAQ08209 521 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 CYTH1Q15438 398 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 ARL10Q8N8L6 244 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 CCDC89Q8N998 374 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 MANSC1Q9H8J5 431 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 LPXNO60711 386 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 STAMBPO95630 424 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 GGPS1O95749 300 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 BFSP1Q12934 665 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 STAT4Q14765 748 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 SMTNL2Q2TAL5 461 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 C3orf62Q6ZUJ4 267 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 DNAAF2Q9NVR5 837 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 NPTX2P47972 431 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 JAM2P57087 298 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 MAP3K10Q02779 954 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 MED21Q13503 144 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 RASA2Q15283 850 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 RIPOR1Q6ZS17 1223 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 PRPF39Q86UA1 669 aaKnown RBP13.56□□□□□ -0.24
PTPRN-202ENST00000409251 GALNT4Q8N4A0 578 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 RNF148Q8N7C7 305 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 SMC1BQ8NDV3 1235 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 PTPRN2Q92932 1015 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 PORCNQ9H237 461 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms