RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 PAFAH2Q99487 392 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 PRPF18Q99633 342 aaKnown RBP23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 VAT1LQ9HCJ6 419 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 TBC1D23Q9NUY8 699 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 SHOC2Q9UQ13 582 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 FRMD4BQ9Y2L6 1034 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 COQ6Q9Y2Z9 468 aa23.33■■□□□ 1.33
CUEDC1-202ENST00000407144 ITGB4P16144 1822 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 PRR5-ARHGAP8B1AHC4 643 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 IPO5O00410 1097 aaKnown RBP23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 GSTT2P0CG29 244 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 GSTT2BP0CG30 244 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 ZNF23P17027 643 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 SERPINB6P35237 376 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 HSPA13P48723 471 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 ARHGAP8P85298 464 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 CNGA3Q16281 694 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 SLC15A2Q16348 729 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 RWDD4Q6NW29 188 aaKnown RBP23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 USP17L2Q6R6M4 530 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 POTEGQ6S5H5 508 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 C3orf67Q6ZVT6 689 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 LZTR1Q8N653 840 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 C12orf65Q9H3J6 166 aaKnown RBP23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 ACSS3Q9H6R3 686 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 EXOC7Q9UPT5 735 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 SQORQ9Y6N5 450 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 SF3B1O75533 1304 aaKnown RBP eCLIP23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 MYPNQ86TC9 1320 aa23.33■■□□□ 1.32
CUEDC1-202ENST00000407144 SCN7AQ01118 1682 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 NUP98P52948 1817 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 E5RJQ4 531 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 I3L4J1 428 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 ITGA7Q13683 1181 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 CAVIN4Q5BKX8 364 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 MDH1BQ5I0G3 518 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 DCAKDQ8WVC6 231 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 CASP10Q92851 521 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 DYNLL2Q96FJ2 89 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 AP4B1Q9Y6B7 739 aa23.32■■□□□ 1.32
CUEDC1-202ENST00000407144 NHSQ6T4R5 1651 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ASTN2O75129 1339 aaPredicted RBP23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SOBPA7XYQ1 873 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 RSPH10B2B2RC85 870 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SOCS7O14512 581 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ADCY6O43306 1168 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ADAM23O75077 832 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 MT-ND3P03897 115 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 RSPH10BP0C881 870 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 POLR2MP0CAP2 368 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 FDX1P10109 184 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 RALAP11233 206 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ALDH3B2P48448 385 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ENTPD1P49961 510 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 BCAP31P51572 246 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 KCNA1Q09470 495 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 C16orf72Q14CZ0 275 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 RABGAP1LQ5R372 815 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 DRICH1Q6PGQ1 229 aaPredicted RBP23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ELMSAN1Q6PJG2 1045 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 CLEC4GQ6UXB4 293 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 TTC17Q96AE7 1141 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SGF29Q96ES7 293 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 PPP1R10Q96QC0 940 aaKnown RBP23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 ACP6Q9NPH0 428 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 TMOD2Q9NZR1 351 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SELENONQ9NZV5 590 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 PSMD13Q9UNM6 376 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 UBE4BO95155 1302 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 TBCAO75347 108 aaKnown RBP23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SGPL1O95470 568 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 PDGFRBP09619 1106 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 S100A1P23297 94 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 MAPK4P31152 587 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 TMED10P49755 219 aaKnown RBP23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 SLC2A7Q6PXP3 512 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 PQLC1Q8N2U9 271 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 DHRS1Q96LJ7 313 aa23.31■■□□□ 1.32
CUEDC1-202ENST00000407144 CLUHO75153 1309 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 TRIM49P0CI25 452 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 TRIM49CP0CI26 452 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 RBP3P10745 1247 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 FMO1Q01740 532 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 ATG16L1Q676U5 607 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 CAPN12Q6ZSI9 719 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 CATSPER3Q86XQ3 398 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 FAM71AQ8IYT1 594 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 OGFOD1Q8N543 542 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 COA7Q96BR5 231 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 FAM111AQ96PZ2 611 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 ADAM33Q9BZ11 813 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 ITGA11Q9UKX5 1188 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 POMPQ9Y244 141 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 BTAF1O14981 1849 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 DENND3A2RUS2 1198 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 THRAP10827 490 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 BFSP1Q12934 665 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 RNASEH2BQ5TBB1 312 aaKnown RBP23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 CIAPIN1Q6FI81 312 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 NEPROQ6NW34 567 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms