RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 UBA3Q8TBC4 463 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 SMARCD1Q96GM5 515 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 TMEM30AQ9NV96 361 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 HESX1Q9UBX0 185 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 FBXW11Q9UKB1 542 aa35.27■■■■□ 3.24
CSNK1E-204ENST00000403904 GOLGA6L6A8MZA4 724 aa35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 AP1G2O75843 785 aa35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 SOAT2O75908 522 aa35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 RBM10P98175 930 aaKnown RBP35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 ANKRD52Q8NB46 1076 aa35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 CDX2Q99626 313 aaPredicted RBP35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 SEPT5Q99719 369 aaPredicted RBP35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 ZNHIT6Q9NWK9 470 aaKnown RBP35.26■■■■□ 3.24
CSNK1E-204ENST00000403904 M0QYV0 167 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 PRRG1O14668 218 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 FAM200BP0CF97 657 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 CHRNB2P17787 502 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 CDR2Q01850 454 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 HYAL1Q12794 435 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 TCEAL8Q8IYN2 117 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 MYLIPQ8WY64 445 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 CDCA3Q99618 268 aaPredicted RBP35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 BEST1O76090 585 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 SERPING1P05155 500 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 PLEKP08567 350 aaPredicted RBP35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 HAPLN1P10915 354 aaPredicted RBP35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 TDRD12Q587J7 1177 aaKnown RBP35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 DENND1BQ6P3S1 775 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 ZNF571Q7Z3V5 609 aaPredicted RBP35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 ZNF677Q86XU0 584 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 PASD1Q8IV76 773 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 SCN4BQ8IWT1 228 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 KCNK16Q96T55 309 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 AGPAT1Q99943 283 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 DUSP16Q9BY84 665 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 PDCL3Q9H2J4 239 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 MAFFQ9ULX9 164 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 PCDHGC3Q9UN70 934 aa35.25■■■■□ 3.23
CSNK1E-204ENST00000403904 C1RP00736 705 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 GRIK1P39086 918 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 MAGEA11P43364 429 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 VSTM1Q6UX27 236 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 CLEC20AQ6ZU45 233 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 CCDC186Q7Z3E2 898 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 SMOQ99835 787 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 MAN1C1Q9NR34 630 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 ARHGAP20Q9P2F6 1191 aa35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 BZW2Q9Y6E2 419 aaKnown RBP35.24■■■■□ 3.23
CSNK1E-204ENST00000403904 NPR3P17342 541 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 GPR15P49685 360 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 MAP3K7CLP57077 242 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 FMO1Q01740 532 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 DDR2Q16832 855 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 PKDCCQ504Y2 493 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 MICALL1Q8N3F8 863 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 VN1R2Q8NFZ6 395 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 SLC7A14Q8TBB6 771 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 GUCD1Q96NT3 240 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 HSFX1Q9UBD0 423 aa35.23■■■■□ 3.23
CSNK1E-204ENST00000403904 F8VP50 259 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 TUFMP49411 452 aaKnown RBP35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 BCAT1P54687 386 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 MEA1Q16626 185 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 PDLIM2Q96JY6 352 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 PANX2Q96RD6 677 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 SYT11Q9BT88 431 aa35.22■■■■□ 3.23
CSNK1E-204ENST00000403904 C8AP07357 584 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 PDE4CQ08493 712 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 KCNC3Q14003 757 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 LIN9Q5TKA1 542 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 SDHAF4Q5VUM1 108 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 ZMIZ2Q8NF64 920 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 SECISBP2LQ93073 1101 aaKnown RBP35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 CHP1Q99653 195 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 PLEKHA4Q9H4M7 779 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 CSNK1G1Q9HCP0 422 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 DMAP1Q9NPF5 467 aaPredicted RBP35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 SEPT11Q9NVA2 429 aaKnown RBP35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 YIPF1Q9Y548 306 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 INSL5Q9Y5Q6 135 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 TULP2O00295 520 aa35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 BST2Q10589 180 aaKnown RBP35.21■■■■□ 3.23
CSNK1E-204ENST00000403904 FAM170AA1A519 330 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 GPD2P43304 727 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 SLC8A3P57103 927 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 GSDMDP57764 484 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 CCDC149Q6ZUS6 474 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 OLIG1Q8TAK6 271 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 GPR152Q8TDT2 470 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 PCDHB18PQ96TA0 734 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 MTMR10Q9NXD2 777 aa35.2■■■■□ 3.23
CSNK1E-204ENST00000403904 LINC01565O15544 149 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 ATF6P18850 670 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 TNFAIP3P21580 790 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 WDTC1Q8N5D0 677 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 EFHBQ8N7U6 833 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 LHX5Q9H2C1 402 aa35.19■■■■□ 3.22
CSNK1E-204ENST00000403904 TRIM66O15016 1216 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 ALDH1A3P47895 512 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 TWF1Q12792 350 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms