RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PSMC1P62191 440 aaKnown RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 GCNT1Q02742 428 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 PEX6Q13608 980 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 UBAP2LQ14157 1087 aaKnown RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 CEP128Q6ZU80 1094 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 IGDCC3Q8IVU1 814 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.6□□□□□ -0.87
HPS4-203ENST00000402105 ZNF333Q96JL9 665 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 MTMR12Q9C0I1 747 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 SENP1Q9P0U3 644 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 IQANK1A0A1B0GTG1 560 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 PRPF4O43172 522 aaKnown RBP eCLIP9.6□□□□□ -0.87
HPS4-203ENST00000402105 TYROBPO43914 113 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 ZNF862O60290 1169 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 PDE5AO76074 875 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 TMEM63AO94886 807 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 KRT3P12035 628 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 CDH8P55286 799 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 MYL6P60660 151 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 ZNF200P98182 395 aaPredicted RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 NUDCD3Q8IVD9 361 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 PPIL6Q8IXY8 311 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 CPT1BQ92523 772 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 ATXN7L3BQ96GX2 97 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 RANBP17Q9H2T7 1088 aaKnown RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
HPS4-203ENST00000402105 GPATCH2LQ9NWQ4 482 aa9.6□□□□□ -0.87
HPS4-203ENST00000402105 TNRC6CQ9HCJ0 1690 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 E5RJQ4 531 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 UGT1A9O60656 530 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 TCEA3O75764 348 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 ZMPSTE24O75844 475 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 LMNAP02545 664 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 NCF2P19878 526 aaPredicted RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 CAP2P40123 477 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 TNFSF9P41273 254 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 RANBP1P43487 201 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PRKG1Q13976 671 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 KLHL38Q2WGJ6 581 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PPP6R3Q5H9R7 873 aaPredicted RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 C16orf46Q6P387 395 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 JOSD2Q8TAC2 188 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MMP19Q99542 508 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 UGT1A7Q9HAW7 530 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 UGT1A10Q9HAW8 530 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 UGT1A8Q9HAW9 530 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 IRAK4Q9NWZ3 460 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 ZNF541Q9H0D2 1346 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 hCG_1818297A0A087WSY0 165 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MCF2LO15068 1137 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 CSDE1O75534 798 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 WFS1O76024 890 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 SLC25A3Q00325 362 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PRKCEQ02156 737 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PGM5Q15124 567 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 TMEM35BQ8NCS4 154 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 SHKBP1Q8TBC3 707 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 LRCH1Q9Y2L9 728 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 SPECC1L-ADORA2AF8WAN1 911 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 VNN1O95497 513 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 CDK16Q00536 496 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 HADHQ16836 314 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 EML3Q32P44 896 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 PRAMEF18Q5VWM3 479 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 CDHR3Q6ZTQ4 885 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 ENOSF1Q7L5Y1 443 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 POLNQ7Z5Q5 900 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 ARHGAP24Q8N264 748 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MTBPQ96DY7 904 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 MFSD14AQ96MC6 490 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
HPS4-203ENST00000402105 ACSS2Q9NR19 701 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 NDE1Q9NXR1 346 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 SLC24A2Q9UI40 661 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 FEM1BQ9UK73 627 aa9.59□□□□□ -0.87
HPS4-203ENST00000402105 TCRBV9S1A1TA0A576 114 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 H0YIN7 160 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 KCNN4O15554 427 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 EXTL3O43909 919 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 CYP1A1P04798 512 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 F7P08709 466 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 ACADSP16219 412 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 CDH6P55285 790 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 RIPOR1Q6ZS17 1223 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 FAM160B2Q86V87 743 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 C4orf19Q8IY42 314 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 SEPT12Q8IYM1 358 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 TTLL6Q8N841 843 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 RBM15BQ8NDT2 890 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 GSTCDQ8NEC7 633 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms