RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 TXNRD3Q86VQ6 643 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 FUKQ8N0W3 1084 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 RIBC1Q8N443 379 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 SCFD2Q8WU76 684 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 CAVIN3Q969G5 261 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 MOV10L1Q9BXT6 1211 aaKnown RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 TASP1Q9H6P5 420 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 TJP2Q9UDY2 1190 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 COL5A2P05997 1499 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 MAFGO15525 162 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 USP10Q14694 798 aaKnown RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 TRIM16LQ309B1 348 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 DCAF4L1Q3SXM0 396 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 C2CD6Q53TS8 623 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 VPS50Q96JG6 964 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 ZSWIM1Q9BR11 485 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 RIC8BQ9NVN3 520 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 C6orf203Q9P0P8 240 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 TUBGCP4Q9UGJ1 667 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 C15orf41Q9Y2V0 281 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 GRAP2O75791 330 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 RGS7P49802 495 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 GEMIN4P57678 1058 aaKnown RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 COL9A3Q14050 684 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 SYTL3Q4VX76 610 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 TTC33Q6PID6 262 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 ZNF786Q8N393 782 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 AFG1LQ8WV93 481 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 DMAP1Q9NPF5 467 aaPredicted RBP9.22□□□□□ -0.93
PTPRM-202ENST00000400053 PCDHA10Q9Y5I2 948 aa9.22□□□□□ -0.93
PTPRM-202ENST00000400053 EVPLLA8MZ36 301 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 RGL2O15211 777 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 MYL2P10916 166 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 NUDT2P50583 147 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 SNRNP35Q16560 246 aaKnown RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 SNRNP48Q6IEG0 339 aaKnown RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 MICU2Q8IYU8 434 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 FAM9CQ8IZT9 166 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 TTC30BQ8N4P2 665 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 RBBP8NLQ8NC74 664 aaPredicted RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 MAGEB18Q96M61 343 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 CNPY3Q9BT09 278 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 PI4K2AQ9BTU6 479 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 GRID1Q9ULK0 1009 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 H7C0S8 307 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 FOXN3O00409 490 aaPredicted RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 CYP11B2P19099 503 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 HSPA13P48723 471 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 FNTAP49354 379 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 SPP2Q13103 211 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 FAXCQ5TGI0 409 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 MOXD1Q6UVY6 613 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 TTC30AQ86WT1 665 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 FAM71DQ8N9W8 422 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 DDHD1Q8NEL9 900 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 OLFM1Q99784 485 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 RTFDC1Q9BY42 306 aaPredicted RBP9.21□□□□□ -0.93
PTPRM-202ENST00000400053 SLC30A1Q9Y6M5 507 aa9.21□□□□□ -0.93
PTPRM-202ENST00000400053 F8VZ95 297 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 MAP2K7O14733 419 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 MOCS2O96007 188 aaPredicted RBP9.21□□□□□ -0.94
PTPRM-202ENST00000400053 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.94
PTPRM-202ENST00000400053 C4orf22Q6V702 233 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 RIOX1Q9H6W3 641 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 EXOSC4Q9NPD3 245 aaKnown RBP9.21□□□□□ -0.94
PTPRM-202ENST00000400053 SOX13Q9UN79 622 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 MYL3P08590 195 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 EFNA5P52803 228 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 NUP107P57740 925 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 NCALDP61601 193 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 PURAQ00577 322 aaKnown RBP9.21□□□□□ -0.94
PTPRM-202ENST00000400053 TTLL4Q14679 1199 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 CCDC142Q17RM4 750 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 CNDP1Q96KN2 507 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 AFF4Q9UHB7 1163 aaKnown RBP9.21□□□□□ -0.94
PTPRM-202ENST00000400053 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 PCDHB2Q9Y5E7 798 aa9.21□□□□□ -0.94
PTPRM-202ENST00000400053 A8MXQ7 604 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 NFIBO00712 420 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 CLPTM1O96005 669 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 ST13P50502 369 aaKnown RBP9.2□□□□□ -0.94
PTPRM-202ENST00000400053 NLRP11P59045 1033 aaKnown RBP9.2□□□□□ -0.94
PTPRM-202ENST00000400053 IFI35P80217 286 aaPredicted RBP9.2□□□□□ -0.94
PTPRM-202ENST00000400053 SLC9A5Q14940 896 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 C16orf62Q7Z3J2 963 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 ZKSCAN4Q969J2 545 aaPredicted RBP9.2□□□□□ -0.94
PTPRM-202ENST00000400053 SGF29Q96ES7 293 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 RIT2Q99578 217 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 KRCC1Q9NPI7 259 aaPredicted RBP9.2□□□□□ -0.94
PTPRM-202ENST00000400053 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
PTPRM-202ENST00000400053 E7ENQ6 273 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms