RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 FGD2Q7Z6J4 655 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.71□□□□□ -0.86
ATL3-201ENST00000398868 MICU2Q8IYU8 434 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 SHCBP1Q8NEM2 672 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 BATF3Q9NR55 127 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 ARHGEF3Q9NR81 526 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 DONSONQ9NYP3 566 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 TUBE1Q9UJT0 475 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 MID2Q9UJV3 735 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 SESN1Q9Y6P5 492 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 WTIPA6NIX2 430 aaPredicted RBP9.71□□□□□ -0.86
ATL3-201ENST00000398868 SCAMP1O15126 338 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 TPD52L2O43399 206 aaKnown RBP9.71□□□□□ -0.86
ATL3-201ENST00000398868 PTPN7P35236 360 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 TXNRD3Q86VQ6 643 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 MB21D2Q8IYB1 491 aaPredicted RBP9.71□□□□□ -0.86
ATL3-201ENST00000398868 C17orf80Q9BSJ5 609 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 CYP4F12Q9HCS2 524 aa9.71□□□□□ -0.86
ATL3-201ENST00000398868 CCDC188H7C350 402 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 RNF103O00237 685 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ANGPT2O15123 496 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 PGK1P00558 417 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 HLA-DRAP01903 254 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 PRKCQQ04759 706 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SNAP47Q5SQN1 464 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 LRRC8BQ6P9F7 803 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 OLFML1Q6UWY5 402 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DET1Q7L5Y6 550 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SEMA4DQ92854 862 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 FAM162AQ96A26 154 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DDX50Q9BQ39 737 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 OSBPL10Q9BXB5 764 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 MOV10L1Q9BXT6 1211 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 CRLS1Q9UJA2 301 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SLC39A10Q9ULF5 831 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SLC37A4O43826 429 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ALDH1A2O94788 518 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ARP10275 920 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 EPHB2P29323 1055 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DSG1Q02413 1049 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 TTC33Q6PID6 262 aaPredicted RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 MARK2Q7KZI7 788 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 CDCA5Q96FF9 252 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 CELF4Q9BZC1 486 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 KIAA1586Q9HCI6 787 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ADARB2Q9NS39 739 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 MYMKA6NI61 221 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SNUPNO95149 360 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 CALCAP01258 141 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ABCB1P08183 1280 aaPredicted RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 RHOT2Q8IXI1 618 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ZIM3Q96PE6 472 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SLITRK1Q96PX8 696 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ATXN3LQ9H3M9 355 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 TMEM165Q9HC07 324 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 MRPL40Q9NQ50 206 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ADGRG1Q9Y653 693 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SSH2Q76I76 1423 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 TUBGCP3Q96CW5 907 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 C9orf72Q96LT7 481 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 REXO4Q9GZR2 422 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 RHBGQ9H310 441 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DIABLOQ9NR28 239 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATL3-201ENST00000398868 C3orf70A6NLC5 250 aaPredicted RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 MT-CO1P00395 513 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 KLRC1P26715 233 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 CORO7P57737 925 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DEFA1P59665 94 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 DEFA3P59666 94 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 TFDP2Q14188 446 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 BTG3Q14201 252 aaPredicted RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 INPP5AQ14642 412 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 PTGISQ16647 500 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 SV2CQ496J9 727 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 MTBPQ96DY7 904 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 NARS2Q96I59 477 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 CELF6Q96J87 481 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 TARSL2A2RTX5 802 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 AXIN1O15169 862 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 URODP06132 367 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 FAM200BP0CF97 657 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ALDH9A1P49189 494 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 ST13P50502 369 aaKnown RBP9.7□□□□□ -0.86
ATL3-201ENST00000398868 PLD1Q13393 1074 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 XKR3Q5GH77 459 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 MROH9Q5TGP6 573 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 AHI1Q8N157 1196 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 LRRN4Q8WUT4 740 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 HES6Q96HZ4 224 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
ATL3-201ENST00000398868 BFARQ9NZS9 450 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms