RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ALLCQ8N6M5 410 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 HIPK4Q8NE63 616 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 OLIG1Q8TAK6 271 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 GRAMD1AQ96CP6 724 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 KIF12Q96FN5 646 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TXLNGYQ9BZA5 131 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ELOVL4Q9GZR5 314 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PDGFCQ9NRA1 345 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PCMTD2Q9NV79 361 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PIH1D1Q9NWS0 290 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MAP3K20Q9NYL2 800 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SLC17A7Q9P2U7 560 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MARCOQ9UEW3 520 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 RASSF9O75901 435 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ENO1P06733 434 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 UBA1P22314 1058 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SDC4P31431 198 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 GCKP35557 465 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PEX19P40855 299 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ALDH18A1P54886 795 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SESN2P58004 480 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DEUP1Q05D60 604 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ANGPT1Q15389 498 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TTC8Q8TAM2 541 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CD101Q93033 1021 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 C17orf75Q9HAS0 396 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF142P52746 1687 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 LACTBL1A8MY62 500 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 KIF1CO43896 1103 aaKnown RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 MAFO75444 373 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 GSTA1P08263 222 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ELK3P41970 407 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 BNIP1Q12981 228 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 HIF1AQ16665 826 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 C15orf59Q2T9L4 293 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 XRRA1Q6P2D8 792 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CLMNQ96JQ2 1002 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CEP41Q9BYV8 373 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 COQ4Q9Y3A0 265 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 COL4A1P02462 1669 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 DCTN3O75935 186 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 VTNP04004 478 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 STAG3L1P0CL83 205 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 GPX6P59796 221 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 C1QBPQ07021 282 aaKnown RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CA9Q16790 459 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CFAP157Q5JU67 520 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CATSPER4Q7RTX7 472 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 AGGF1Q8N302 714 aaeCLIP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 RXFP2Q8WXD0 754 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 HAPLN2Q9GZV7 340 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ASCC2Q9H1I8 757 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 SLCO1B3Q9NPD5 702 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 RAB6BQ9NRW1 208 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 PABPN1LA6NDY0 278 aaKnown RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 SOWAHBA6NEL2 793 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 KBTBD13C9JR72 458 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ADM5C9JUS6 153 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 MICAL2O94851 1124 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 NPTXRO95502 500 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ANP32DO95626 131 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 TNFAIP2Q03169 654 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 MCL1Q07820 350 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 LAMTOR4Q0VGL1 99 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 NR1H3Q13133 447 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 TAF1BQ53T94 588 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CRELD2Q6UXH1 353 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 PIGWQ7Z7B1 504 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 PCGF5Q86SE9 256 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 RPAINQ86UA6 219 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 CDKL3Q8IVW4 592 aaPredicted RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ARMC2Q8NEN0 867 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 ACTL9Q8TC94 416 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 TCP10LQ8TDR4 215 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 TSNARE1Q96NA8 513 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 GMLQ99445 158 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 SUFUQ9UMX1 484 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.58
SMAD4-202ENST00000398417 GLI3P10071 1580 aa5.15□□□□□ -1.58
SMAD4-202ENST00000398417 TCRBV7S3A2A0A539 114 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 TXNDC9O14530 226 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RGS20O76081 388 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 PDHA1P08559 390 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 VDRP11473 427 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 EPHB2P29323 1055 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SULT1E1P49888 294 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 EPHB1P54762 984 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RPL10AP62906 217 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RNASELQ05823 741 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 DPYSL3Q14195 570 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 DBN1Q16643 649 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ANKS1BQ7Z6G8 1248 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 ZCCHC9Q8N567 271 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SERAC1Q96JX3 654 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 RMDN2Q96LZ7 410 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 NUDCD1Q96RS6 583 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SMAD5Q99717 465 aaKnown RBP5.15□□□□□ -1.59
SMAD4-202ENST00000398417 OSBPL1AQ9BXW6 950 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 CDT1Q9H211 546 aa5.15□□□□□ -1.59
SMAD4-202ENST00000398417 SMYD3Q9H7B4 428 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms