RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TLR8Q9NR97 1041 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 TRIM66O15016 1216 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 LAG3P18627 525 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 HPDP32754 393 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 GARSP41250 739 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 EIF3EP60228 445 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 RAD51Q06609 339 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CHSY1Q86X52 802 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 ATL2Q8NHH9 583 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 DDX47Q9H0S4 455 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 FAM124BQ9H5Z6 455 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CFAP69A5D8W1 941 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 A6NNZ2 444 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 RRP9O43818 475 aaKnown RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 ZMYND10O75800 440 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CLTBP09497 229 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 TUBB8Q3ZCM7 444 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 C2CD6Q53TS8 623 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CEP85LQ5SZL2 805 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 ZNF618Q5T7W0 954 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CDCA2Q69YH5 1023 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 SPATA4Q8NEY3 305 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 C18orf25Q96B23 403 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 PKNOX2Q96KN3 472 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CFAP57Q96MR6 1250 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 FSD1LQ9BXM9 530 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 AVENQ9NQS1 362 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 KLHL11Q9NVR0 708 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 CHORDC1Q9UHD1 332 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-204ENST00000397606 MRFAP1Q9Y605 127 aa8.67□□□□□ -1.02
PTPRD-204ENST00000397606 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PROSCO94903 275 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 CKMP06732 381 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ARL4CP56559 192 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 YWHAZP63104 245 aaKnown RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 SNX27Q96L92 541 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 HSFY1Q96LI6 401 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ATP8A1Q9Y2Q0 1164 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 KIF3CO14782 793 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 TLL1O43897 1013 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 C4BPAP04003 597 aaKnown RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 INHBAP08476 426 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 DHX9Q08211 1270 aaKnown RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 MTA1Q13330 715 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ZNF235Q14590 738 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ZC3H18Q86VM9 953 aaKnown RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 MIB1Q86YT6 1006 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 C1orf54Q8WWF1 131 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ATRIPQ8WXE1 791 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PGLYRP2Q96PD5 576 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ZSWIM1Q9BR11 485 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 STK39Q9UEW8 545 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 SNX24Q9Y343 169 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 MYH8P13535 1937 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 OR6C75A6NL08 312 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 DFFAO00273 331 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 YWHAQP27348 245 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ADSSP30520 456 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 CTNNB1P35222 781 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 SLC7A5Q01650 507 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ADIGQ0VDE8 80 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ANO4Q32M45 955 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 ZBTB41Q5SVQ8 909 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 SYDE1Q6ZW31 735 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 FAM172AQ8WUF8 416 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 RXFP2Q8WXD0 754 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 OLA1Q9NTK5 396 aaKnown RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 TMEM161AQ9NX61 479 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 UXTQ9UBK9 157 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-204ENST00000397606 TUBGCP4Q9UGJ1 667 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 BDNFP23560 247 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PDK1Q15118 436 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PDK2Q15119 407 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 NPAS4Q8IUM7 802 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 PYROXD1Q8WU10 500 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
PTPRD-204ENST00000397606 XYLBO75191 536 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 KRT14P02533 472 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 NPR3P17342 541 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ATP4AP20648 1035 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SMARCB1Q12824 385 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SMTNL2Q2TAL5 461 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SLC10A6Q3KNW5 377 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 CCDC149Q6ZUS6 474 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 PID1Q7Z2X4 250 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms