RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PTPN21Q16825 1174 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 MTSS1LQ765P7 747 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 FAM35AQ86V20 835 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 STKLD1Q8NE28 680 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 SHKBP1Q8TBC3 707 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 SLC2A14Q8TDB8 520 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 NXPE3Q969Y0 559 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 CYFIP2Q96F07 1278 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 SMARCD1Q96GM5 515 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 TMEM176AQ96HP8 235 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 SPATA17Q96L03 361 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 C8orf48Q96LL4 319 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 EHD2Q9NZN4 543 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 GCNT4Q9P109 453 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 SORCS3Q9UPU3 1222 aa26.94■■□□□ 1.9
TSPAN4-207ENST00000397411 A0A0C4DFX4 3053 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 F8VP50 259 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 AP1G2O75843 785 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 EEF1GP26641 437 aaKnown RBP26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 VWA3BQ502W6 1294 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 TCP11X2Q5H9J9 407 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 RRAGAQ7L523 313 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 ANKRD20A12PQ8NF67 263 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 ST13P5Q8NFI4 369 aaPredicted RBP26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 LMO3Q8TAP4 145 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 WHAMMQ8TF30 809 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 KHSRPQ92945 711 aaKnown RBP eCLIP26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 CEP295NLQ96MC4 621 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 PCDHB4Q9Y5E5 795 aa26.93■■□□□ 1.9
TSPAN4-207ENST00000397411 PTPRDP23468 1912 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 PI4K2BG5E9Z4 385 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 CDK11BP21127 795 aaKnown RBP26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 MYL5Q02045 173 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 TDGQ13569 410 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 ANO6Q4KMQ2 910 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 GAREM2Q75VX8 874 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 FUKQ8N0W3 1084 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 RSAD2Q8WXG1 361 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 NDST4Q9H3R1 872 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 DMAP1Q9NPF5 467 aaPredicted RBP26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 KRT82Q9NSB4 513 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 FANCLQ9NW38 375 aa26.92■■□□□ 1.9
TSPAN4-207ENST00000397411 MOSPD3O75425 235 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 NOL4O94818 638 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 FAM200BP0CF97 657 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 HMGA1P17096 107 aaKnown RBP26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 EXOC3L4Q17RC7 722 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 GPR158Q5T848 1215 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 DENND5BQ6ZUT9 1274 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 HNRNPABQ99729 332 aaKnown RBP26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 EPHX3Q9H6B9 360 aa26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 UBE2TQ9NPD8 197 aaPredicted RBP26.91■■□□□ 1.9
TSPAN4-207ENST00000397411 RAD23BP54727 409 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 IFRD2Q12894 506 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 PARM1Q6UWI2 310 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 PAQR9Q6ZVX9 377 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 ARHGEF19Q8IW93 802 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 MRPS31Q92665 395 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 KCNK16Q96T55 309 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 NUMBLQ9Y6R0 609 aa26.9■■□□□ 1.9
TSPAN4-207ENST00000397411 SYCE3A1L190 88 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 GTPBP10A4D1E9 387 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 ANHXE9PGG2 379 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 CD19P15391 556 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 SLC9A1P19634 815 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 CACNA2D1P54289 1103 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 MAP3K7CLP57077 242 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 ZXDAP98168 799 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 CYP4F8P98187 520 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 HTR4Q13639 388 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 TMEM270Q6UE05 265 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 UBALD2Q8IYN6 164 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 NUP93Q8N1F7 819 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 SLC44A3Q8N4M1 653 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 SLC4A11Q8NBS3 891 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 ZSCAN18Q8TBC5 510 aaPredicted RBP26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 TRMT2BQ96GJ1 504 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 FAM81BQ96LP2 452 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 ZSWIM3Q96MP5 696 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 IL21Q9HBE4 155 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 ZFP14Q9HCL3 533 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 TAB2Q9NYJ8 693 aa26.89■■□□□ 1.9
TSPAN4-207ENST00000397411 SMTNL1A8MU46 457 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 RTN3O95197 1032 aaPredicted RBP26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 F11P03951 625 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 MFAP3P55082 362 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 GCNT1Q02742 428 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 FAM78AQ5JUQ0 283 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 AOPEPQ8N6M6 819 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 EDAQ92838 391 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 FGF14Q92915 247 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 SMARCD2Q92925 531 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 MYRFLQ96LU7 910 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 KXD1Q9BQD3 176 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 VPS16Q9H269 839 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 TASP1Q9H6P5 420 aa26.88■■□□□ 1.89
TSPAN4-207ENST00000397411 NRG2O14511 850 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 KRT5P13647 590 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 SLC8A3P57103 927 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 SGO2Q562F6 1265 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms