RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 SH3RF3Q8TEJ3 882 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 DTNBP1Q96EV8 351 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 MRPS7Q9Y2R9 242 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 ABCC1P33527 1531 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 CYP24A1Q07973 514 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMU1-201ENST00000397149 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 WDR41Q9HAD4 459 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 RNASEH1O60930 286 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 PCP11498 1178 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 HIRAP54198 1017 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 UGP2Q16851 508 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 ZCCHC8Q6NZY4 707 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 TMEM143Q96AN5 459 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 RUVBL2Q9Y230 463 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 PTSQ03393 145 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 SPPL2AQ8TCT8 520 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 ZNF669Q96BR6 464 aaPredicted RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 NMD3Q96D46 503 aaKnown RBP12.78□□□□□ -0.36
SMU1-201ENST00000397149 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 A0A1W2PQ27 194 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 A0A1W2PQ64 194 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 KLHL2O95198 593 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 PRKCBP05771 671 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 CCT8P50990 548 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 BTN3A2P78410 334 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 VAC14Q08AM6 782 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 WDR60Q8WVS4 1066 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 DPF3Q92784 378 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 MIEF2Q96C03 454 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 LXNQ9BS40 222 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 CHST12Q9NRB3 414 aa12.78□□□□□ -0.36
SMU1-201ENST00000397149 MSH4O15457 936 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
SMU1-201ENST00000397149 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.36
SMU1-201ENST00000397149 PRCPP42785 496 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 GRIK3Q13003 919 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.36
SMU1-201ENST00000397149 KNOP1Q1ED39 458 aaKnown RBP12.77□□□□□ -0.36
SMU1-201ENST00000397149 USP7Q93009 1102 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 LOC102724428A0A0B4J2F2 783 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 C1orf232A0A0U1RR37 186 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 PSTPIP1O43586 416 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 TXNP10599 105 aaKnown RBP12.77□□□□□ -0.36
SMU1-201ENST00000397149 CYP2B6P20813 491 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 ARHGDIBP52566 201 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 SIK1P57059 783 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 NFYCQ13952 458 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 FAXCQ5TGI0 409 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 UNC13DQ70J99 1090 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 STK39Q9UEW8 545 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 LNPEPQ9UIQ6 1025 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.36
SMU1-201ENST00000397149 ZNF185O15231 689 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 VPS26AO75436 327 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 POLBP06746 335 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 QARSP47897 775 aaKnown RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 PEX5P50542 639 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 DSG1Q02413 1049 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 TMEM132BQ14DG7 1078 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMU1-201ENST00000397149 CCSER1Q9C0I3 900 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 TRIT1Q9H3H1 467 aaKnown RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 KATNA1O75449 491 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 MT-CO1P00395 513 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 RXRBP28702 533 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 OVGP1Q12889 678 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 TAF4O00268 1085 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 ECDO95905 644 aaPredicted RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 CYP2D6P10635 497 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 STAT4Q14765 748 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 PACS1Q6VY07 963 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 TBCDQ9BTW9 1192 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.37
SMU1-201ENST00000397149 GJB4Q9NTQ9 266 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 COMMD9Q9P000 198 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.37
SMU1-201ENST00000397149 FAM220BPB1ANY3 271 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 ASNA1O43681 348 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 PTK6Q13882 451 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
SMU1-201ENST00000397149 TTLL9Q3SXZ7 439 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms