RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 VCANP13611 3396 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 GREM1O60565 184 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 F11P03951 625 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 PNMA6AP0CW24 399 aaPredicted RBP11.26□□□□□ -0.61
NUP98-205ENST00000397007 NRIP1P48552 1158 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 CBX2Q14781 532 aaPredicted RBP11.26□□□□□ -0.61
NUP98-205ENST00000397007 PTPN21Q16825 1174 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ARCQ7LC44 396 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ZNF606Q8WXB4 792 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 CASP10Q92851 521 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ADAM7Q9H2U9 754 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ENTPD7Q9NQZ7 604 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
NUP98-205ENST00000397007 YIPF1Q9Y548 306 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 IGLV3-25P01717 112 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 RNF43Q68DV7 783 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 ACOT1Q86TX2 421 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 OVCA2Q8WZ82 227 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 TRPV4Q9HBA0 871 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 MAN1C1Q9NR34 630 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 XPO1O14980 1071 aaKnown RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 CCDC130P13994 396 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 CCR2P41597 374 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 ZBED6P86452 979 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 NFE2Q16621 373 aaPredicted RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 SLC39A12Q504Y0 691 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 MDH1BQ5I0G3 518 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 KIAA1958Q8N8K9 716 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 PRKD2Q9BZL6 878 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 SFXN1Q9H9B4 322 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 TULP2O00295 520 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 GFRA2O00451 464 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 MFAP3LO75121 409 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 PHACTR2O75167 634 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 CALCAP01258 141 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 HOXB8P17481 243 aaPredicted RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 SCNN1AP37088 669 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 PGFP49763 221 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 YWHAEP62258 255 aaKnown RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 CENPCQ03188 943 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 CETN1Q12798 172 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 TRIM14Q14142 442 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 TPD52L1Q16890 204 aaPredicted RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 SCARA5Q6ZMJ2 495 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 PALB2Q86YC2 1186 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
NUP98-205ENST00000397007 ZFRQ96KR1 1074 aaKnown RBP11.25□□□□□ -0.61
NUP98-205ENST00000397007 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 FCARP24071 287 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 GPR15P49685 360 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 USP46P62068 366 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 NOMO3P69849 1222 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 STILQ15468 1287 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 CCDC186Q7Z3E2 898 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 TMC7Q7Z402 723 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 METTL23Q86XA0 190 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 KREMEN2Q8NCW0 462 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 MMRN2Q9H8L6 949 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 ARHGAP20Q9P2F6 1191 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 DNMT3BQ9UBC3 853 aaKnown RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 ASB3Q9Y575 518 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 CLDN5O00501 218 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 GLUD1P00367 558 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 FYNP06241 537 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 ANXA13P27216 316 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 CDR2Q01850 454 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 FKBP15Q5T1M5 1219 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 OTUD1Q5VV17 481 aaPredicted RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 PPM1KQ8N3J5 372 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 SLC2A14Q8TDB8 520 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 SMARCD1Q96GM5 515 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 PCDHB5Q9Y5E4 795 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 A8MXQ7 604 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 PER2O15055 1255 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 LSM8O95777 96 aaKnown RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 SETSIPP0DME0 302 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 NPR3P17342 541 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 CYP2F1P24903 491 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 TUBP50607 506 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 SLC5A9Q2M3M2 681 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 ZNF571Q7Z3V5 609 aaPredicted RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 ATAD1Q8NBU5 361 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
NUP98-205ENST00000397007 IMPG2Q9BZV3 1241 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 ABHD10Q9NUJ1 306 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
NUP98-205ENST00000397007 TRIM66O15016 1216 aa11.23□□□□□ -0.61
NUP98-205ENST00000397007 CYP26A1O43174 497 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms