RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MIPP30301 263 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 MORF4L2Q15014 288 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 RAB6CQ53S08 254 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 MS4A4AQ96JQ5 239 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 RAB6CQ9H0N0 254 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 BARX2Q9UMQ3 279 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 BTBD19C9JJ37 291 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 CDH16O75309 829 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 IFNB1P01574 187 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 HMGCRP04035 888 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 GRIK4Q16099 956 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 PRCCQ92733 491 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 PIWIL1Q96J94 861 aaKnown RBP17.4■□□□□ 0.38
TRIM39-205ENST00000396551 ACAP3Q96P50 834 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 PEBP4Q96S96 227 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 C2CD2Q9Y426 696 aa17.4■□□□□ 0.38
TRIM39-205ENST00000396551 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.38
TRIM39-205ENST00000396551 PIK3R2O00459 728 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 SMPD1P17405 629 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 MKRN3Q13064 507 aaKnown RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 SH3PXD2AQ5TCZ1 1133 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 CCDC121Q6ZUS5 278 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 PFKMP08237 780 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 P4HA1P13674 534 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 BRAFP15056 766 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 GAD2Q05329 585 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 ACTN3Q08043 901 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 FAM102AQ5T9C2 384 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.37
TRIM39-205ENST00000396551 CMASQ8NFW8 434 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 FARP1Q9Y4F1 1045 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-205ENST00000396551 VIMP08670 466 aaKnown RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 RBP5P82980 135 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 KYAT1Q16773 422 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CEP128Q6ZU80 1094 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CYP4V2Q6ZWL3 525 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CCDC197Q8NCU1 140 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 MAML1Q92585 1016 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ADPGKQ9BRR6 497 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 KCNK9Q9NPC2 374 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 DNM1LO00429 736 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 BANF1O75531 89 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 STAU1O95793 577 aaKnown RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 MMP3P08254 477 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 FBXW10Q5XX13 1052 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 C12orf29Q8N999 325 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CCT6BQ92526 530 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 HSPH1Q92598 858 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CFAP57Q96MR6 1250 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 TSPAN16Q9UKR8 245 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 USP18Q9UMW8 372 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 SHOC2Q9UQ13 582 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ADCY6O43306 1168 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ANKRD20A8PQ5CZ79 823 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ANKRD22Q5VYY1 191 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 SRRM1Q8IYB3 904 aaKnown RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 ELAC2Q9BQ52 826 aaKnown RBP17.38■□□□□ 0.37
TRIM39-205ENST00000396551 CCDC77Q9BR77 488 aa17.38■□□□□ 0.37
TRIM39-205ENST00000396551 PPEF2O14830 753 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 ALOX15BO15296 676 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 GRM5P41594 1212 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 LCLAT1Q6UWP7 414 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 FAM183BPQ6ZVS7 135 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 KCTD6Q8NC69 237 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 NME7Q9Y5B8 376 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 E5RJQ4 531 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 GOLGA8MH3BSY2 632 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 HOXD8P13378 290 aaPredicted RBP17.37■□□□□ 0.37
TRIM39-205ENST00000396551 ADCY1Q08828 1119 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 TMED2Q15363 201 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 KIZQ2M2Z5 673 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 RFX6Q8HWS3 928 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 UNC45BQ8IWX7 931 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 TTC13Q8NBP0 860 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 CPT1BQ92523 772 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
TRIM39-205ENST00000396551 CCL15-CCL14A0A0B4J2E2 113 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 EXOC1LA0A1B0GW35 172 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 RPL22P35268 128 aaKnown RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ZNF143P52747 638 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-205ENST00000396551 MMRN1Q13201 1228 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 ACAP1Q15027 740 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 CCL15Q16663 113 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
TRIM39-205ENST00000396551 CCDC13Q8IYE1 715 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms