RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MCL1Q07820 350 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 KLHL30Q0D2K2 578 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 SURF1Q15526 300 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 SLC18A3Q16572 532 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 RTL10Q7L3V2 364 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 FMNL3Q8IVF7 1028 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 ITFG1Q8TB96 612 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 DDX27Q96GQ7 796 aaKnown RBP18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 INTS2Q9H0H0 1204 aaKnown RBP18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 TOPORSQ9NS56 1045 aaPredicted RBP18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 DLGAP2Q9P1A6 1054 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 POLIQ9UNA4 740 aa18.62■□□□□ 0.57
TNFSF13-205ENST00000396545 NOTCH4Q99466 2003 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 DMXL1Q9Y485 3027 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 I3L4J1 428 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 TRAPPC3O43617 180 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 PROZP22891 400 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 MATR3P43243 847 aaKnown RBP eCLIP18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 YARSP54577 528 aaKnown RBP18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 PSMD6Q15008 389 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 ZNF568Q3ZCX4 644 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 MPZL3Q6UWV2 235 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 ANKS3Q6ZW76 656 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 LMO3Q8TAP4 145 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 SAAL1Q96ER3 474 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 TCHPQ9BT92 498 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 CCDC94Q9BW85 323 aaPredicted RBP18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 ATP8B3O60423 1300 aa18.61■□□□□ 0.57
TNFSF13-205ENST00000396545 ANO9A1A5B4 782 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 GOLGA8IPA6NC78 632 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 GOLGA8JA6NMD2 632 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 ABLIM1O14639 778 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 OGTO15294 1046 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 ADRB2P07550 413 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 BRCC3P46736 316 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 GPC5P78333 572 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 DLG4P78352 724 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 CLDN10P78369 228 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 ELF2Q15723 593 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 PAPD7Q5XG87 772 aaKnown RBP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 MTSS1LQ765P7 747 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 SNX27Q96L92 541 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 ZMAT2Q96NC0 199 aaKnown RBP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 FAM213AQ9BRX8 229 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 SLC38A7Q9NVC3 462 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 HCFC1R1Q9NWW0 138 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 DNMT3BQ9UBC3 853 aaKnown RBP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 SIT1Q9Y3P8 196 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 DUSP10Q9Y6W6 482 aa18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 V9GYY5 206 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13-205ENST00000396545 DCNP07585 359 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 AP3M2P53677 418 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 STARD6P59095 220 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 OSTNP61366 133 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 PPP3CAQ08209 521 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 WHAMMP3Q1A5X7 153 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 ERCC6LQ2NKX8 1250 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 PABPC1LQ4VXU2 614 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 KRT39Q6A163 491 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 GJB7Q6PEY0 223 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 RSRC2Q7L4I2 434 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 TRAPPC11Q7Z392 1133 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 GPIHBP1Q8IV16 184 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 NPAS3Q8IXF0 933 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 ZSWIM2Q8NEG5 633 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 PLEKHO2Q8TD55 490 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 FNBP1Q96RU3 617 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 STK33Q9BYT3 514 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 TMEM8AQ9HCN3 771 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 LUC7LQ9NQ29 371 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 ANKFY1Q9P2R3 1169 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 APEX2Q9UBZ4 518 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 NENFQ9UMX5 172 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 COQ4Q9Y3A0 265 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 A0A087X0T9 212 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 PODXLO00592 558 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 FAM228BP0C875 321 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 MCF2P10911 925 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 KCNE1P15382 129 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 FERP16591 822 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 STAT1P42224 750 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 MXI1P50539 228 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 SLC8B1Q6J4K2 584 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 ZNF571Q7Z3V5 609 aaPredicted RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 CEP112Q8N8E3 955 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 TRIM58Q8NG06 486 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 PJA1Q8NG27 643 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 ZBTB45Q96K62 511 aaPredicted RBP18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 FOXQ1Q9C009 403 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 CNTN3Q9P232 1028 aa18.59■□□□□ 0.57
TNFSF13-205ENST00000396545 F8VZ95 297 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 MEFVO15553 781 aaPredicted RBP18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 GFPT2O94808 682 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 SOX5P35711 763 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 ROR1Q01973 937 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms