RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MRPS9P82933 396 aaKnown RBP14.99□□□□□ -0.01
CLIP2-203ENST00000395060 MORF4L2Q15014 288 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 LPCAT4Q643R3 524 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 ANO5Q75V66 913 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 ZNF276Q8N554 614 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 BANPQ8N9N5 519 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 MMP19Q99542 508 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 EHMT1Q9H9B1 1298 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 SAR1AQ9NR31 198 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 ZNF277Q9NRM2 450 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-203ENST00000395060 LNPEPQ9UIQ6 1025 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 EXOC7Q9UPT5 735 aa14.99□□□□□ -0.01
CLIP2-203ENST00000395060 KBTBD13C9JR72 458 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 DLDP09622 509 aaKnown RBP14.98□□□□□ -0.01
CLIP2-203ENST00000395060 PHBP35232 272 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 RPL22P35268 128 aaKnown RBP14.98□□□□□ -0.01
CLIP2-203ENST00000395060 CCNFP41002 786 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 RTP1P59025 263 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 SLC25A3Q00325 362 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 MCL1Q07820 350 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 RAPH1Q70E73 1250 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 OR5B17Q8NGF7 314 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 PANX3Q96QZ0 392 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 IDI2Q9BXS1 227 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 AVENQ9NQS1 362 aaPredicted RBP14.98□□□□□ -0.01
CLIP2-203ENST00000395060 SENP1Q9P0U3 644 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 NUB1Q9Y5A7 615 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 TRAFD1O14545 582 aaPredicted RBP14.98□□□□□ -0.01
CLIP2-203ENST00000395060 WEE2P0C1S8 567 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 AQP5P55064 265 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 AP1B1Q10567 949 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 ZRSR2Q15696 482 aaKnown RBP14.98□□□□□ -0.01
CLIP2-203ENST00000395060 EFHC2Q5JST6 749 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 RGS9BPQ6ZS82 235 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 ABRAQ8N0Z2 381 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 TMEM143Q96AN5 459 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 EBF4Q9BQW3 602 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 EBF3Q9H4W6 596 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 GABBR1Q9UBS5 961 aa14.98□□□□□ -0.01
CLIP2-203ENST00000395060 MAGEA13PA6NCF6 341 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 A6NJR5 290 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 PRR5-ARHGAP8B1AHC4 643 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 TRIM49D1C9J1S8 452 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 PLSCR1O15162 318 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ZMPSTE24O75844 475 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ANPEPP15144 967 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ARHGAP8P85298 464 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 LMNB2Q03252 620 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 MYBPC2Q14324 1141 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 CHI3L2Q15782 390 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 DCAKDQ8WVC6 231 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 FAM81BQ96LP2 452 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 GORASP1Q9BQQ3 440 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RANBP17Q9H2T7 1088 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 PARVAQ9NVD7 372 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 STX18Q9P2W9 335 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 CCDC160A6NGH7 325 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ATXN3P54252 364 aaPredicted RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 CUL3Q13618 768 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 MTERF2Q49AM1 385 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SCUBE1Q8IWY4 988 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 OGFOD1Q8N543 542 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 CCDC110Q8TBZ0 833 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SLC26A7Q8TE54 656 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SKA1Q96BD8 255 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 NMD3Q96D46 503 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RBM41Q96IZ5 413 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 AGO4Q9HCK5 861 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SLC24A2Q9UI40 661 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 hCG_1818297A0A087WSY0 165 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 COPEO14579 308 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 IRF6O14896 467 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RNASEH1O60930 286 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RARBP10826 455 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 GMPRP36959 345 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 BST1Q10588 318 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 CUL2Q13617 745 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 TFDP3Q5H9I0 405 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RSPH3Q86UC2 560 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 TDRPQ86YL5 185 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RFX6Q8HWS3 928 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 MAP4K3Q8IVH8 894 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 PDIK1LQ8N165 341 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ZNF606Q8WXB4 792 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ANKRD27Q96NW4 1050 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 RIT2Q99578 217 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 TLE6Q9H808 572 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 PIH1D1Q9NWS0 290 aaKnown RBP14.97□□□□□ -0.01
CLIP2-203ENST00000395060 NDE1Q9NXR1 346 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 ANKRD31Q8N7Z5 1873 aa14.97□□□□□ -0.01
CLIP2-203ENST00000395060 C10orf71Q711Q0 1435 aa14.96□□□□□ -0.01
CLIP2-203ENST00000395060 ZNF541Q9H0D2 1346 aa14.96□□□□□ -0.01
CLIP2-203ENST00000395060 LOC100653049A0A140TA62 436 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms