RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 EIF2AQ9BY44 585 aaKnown RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 GBA2Q9HCG7 927 aaPredicted RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 ZNF148Q9UQR1 794 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 NME7Q9Y5B8 376 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 DOCK3Q8IZD9 2030 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 RALGAPA2Q2PPJ7 1873 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 GMNCA6NCL1 334 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 PFKMP08237 780 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 VDRP11473 427 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 RBP5P82980 135 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 LENG1Q96BZ8 264 aaPredicted RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 ADPGKQ9BRR6 497 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 FAM49AQ9H0Q0 323 aaPredicted RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 SYNCQ9H7C4 482 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 CNOT10Q9H9A5 744 aaKnown RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 SNTG2Q9NY99 539 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 CTNNAL1Q9UBT7 734 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 HES2Q9Y543 173 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 PIK3R2O00459 728 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 NPTXRO95502 500 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 P4HA1P13674 534 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 CHN1P15882 459 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 VCPP55072 806 aaKnown RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 TAZQ16635 292 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 QPCTQ16769 361 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 CCDC38Q502W7 563 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 RAB6CQ53S08 254 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 IQSEC1Q6DN90 963 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 NKD2Q969F2 451 aaPredicted RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 PARK7Q99497 189 aaKnown RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 ROPN1BQ9BZX4 212 aaPredicted RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 RAB6CQ9H0N0 254 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 ROPN1Q9HAT0 212 aaPredicted RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 NEBLO76041 1014 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 ERMARDQ5T6L9 678 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 SH3PXD2AQ5TCZ1 1133 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 EXOC3L1Q86VI1 746 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 RELL1Q8IUW5 271 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 SLC35B2Q8TB61 432 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 TSPAN16Q9UKR8 245 aa14.67□□□□□ -0.06
SNCA-204ENST00000394989 DRG1Q9Y295 367 aaKnown RBP14.67□□□□□ -0.06
SNCA-204ENST00000394989 ZNF236Q9UL36 1845 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 A6NJR5 290 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 FOXO6A8MYZ6 492 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 ARSEP51690 589 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 DYNLT1P63172 113 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 LMNB2Q03252 620 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 MRPL45Q9BRJ2 306 aaKnown RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 C10orf88Q9H8K7 445 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 FLRT1Q9NZU1 646 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 TUBGCP4Q9UGJ1 667 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 GNEQ9Y223 722 aaKnown RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 DNALI1O14645 258 aaPredicted RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 DYNC1LI2O43237 492 aaPredicted RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 F2P00734 622 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 ITGAVP06756 1048 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 KDELR1P24390 212 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 ZBTB6Q15916 424 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 LCLAT1Q6UWP7 414 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 CYP4V2Q6ZWL3 525 aaPredicted RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 NT5DC4Q86YG4 428 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
SNCA-204ENST00000394989 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 C9orf72Q96LT7 481 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 PEBP4Q96S96 227 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 OSMRQ99650 979 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 DONSONQ9NYP3 566 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
SNCA-204ENST00000394989 E5RJQ4 531 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 KRT7P08729 469 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 SMIM10L2AP0DMW4 78 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 SMIM10L2BP0DMW5 78 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CREB1P16220 341 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 MIPP30301 263 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CDR1P51861 262 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 FKBP1BP68106 108 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 GPR162Q16538 588 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 FAM102AQ5T9C2 384 aaPredicted RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 CROCCP2Q86T23 111 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 CENPTQ96BT3 561 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 TBC1D31Q96DN5 1066 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 SNX27Q96L92 541 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 PAX7P23759 505 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 GDF10P55107 478 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 DCAF4L1Q3SXM0 396 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 PPP1R26Q5T8A7 1209 aaPredicted RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 SLC27A1Q6PCB7 646 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 ACTL9Q8TC94 416 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 C18orf25Q96B23 403 aaPredicted RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 SERPINB12Q96P63 405 aa14.65□□□□□ -0.06
SNCA-204ENST00000394989 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
SNCA-204ENST00000394989 RBM15Q96T37 977 aaKnown RBP eCLIP14.65□□□□□ -0.06
SNCA-204ENST00000394989 NT5C1AQ9BXI3 368 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms