RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 HMGA1P17096 107 aaKnown RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 TRIM21P19474 475 aaKnown RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 BDNFP23560 247 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 DDX6P26196 483 aaKnown RBP eCLIP9.11□□□□□ -0.95
APLF-202ENST00000394342 GABRR2P28476 465 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 GPR15P49685 360 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 CDR1P51861 262 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 CDH8P55286 799 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 STX17P56962 302 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 INCA1Q0VD86 236 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 TEAD2Q15562 447 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 DDR2Q16832 855 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 CCDC142Q17RM4 750 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 CCDC40Q4G0X9 1142 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 ARHGAP15Q53QZ3 475 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 PARM1Q6UWI2 310 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 GAREM2Q75VX8 874 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 TTC39CQ8N584 583 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 MLKLQ8NB16 471 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 GIPC2Q8TF65 315 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 SMARCD2Q92925 531 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 SLC35C1Q96A29 364 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 TRMT2BQ96GJ1 504 aaKnown RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 PCED1BQ96HM7 432 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 SPATA17Q96L03 361 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 ELOVL4Q9GZR5 314 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 DNAI2Q9GZS0 605 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 SDCBP2Q9H190 292 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 SMOC2Q9H3U7 446 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 DPEP3Q9H4B8 488 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 TRPV4Q9HBA0 871 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 APOBEC3GQ9HC16 384 aaKnown RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 SLC2A4RGQ9NR83 387 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 RAB20Q9NX57 234 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 RWDD2AQ9UIY3 292 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 COQ4Q9Y3A0 265 aa9.11□□□□□ -0.95
APLF-202ENST00000394342 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
APLF-202ENST00000394342 MYO15AQ9UKN7 3530 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SLC38A8A6NNN8 435 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 NARSO43776 548 aaKnown RBP9.1□□□□□ -0.95
APLF-202ENST00000394342 CCDC192P0DO97 292 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 GJA1P17302 382 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 FCARP24071 287 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 ANXA13P27216 316 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 WEE1P30291 646 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 GRIK1P39086 918 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 FMO5P49326 533 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 NDST1P52848 882 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 NLRP12P59046 1061 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 CBWD6Q4V339 395 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 WDR44Q5JSH3 913 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 CBWD3Q5JTY5 395 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 CBWD5Q5RIA9 395 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 HFE2Q6ZVN8 426 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SCN4BQ8IWT1 228 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 CRYBG2Q8N1P7 616 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 GPR152Q8TDT2 470 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SEMA4DQ92854 862 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 C8orf48Q96LL4 319 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 MYRFLQ96LU7 910 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 KXD1Q9BQD3 176 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SRRTQ9BXP5 876 aaKnown RBP9.1□□□□□ -0.95
APLF-202ENST00000394342 B3GNT5Q9BYG0 378 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 ATXN3LQ9H3M9 355 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 ZFP14Q9HCL3 533 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 EHD2Q9NZN4 543 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 WNT16Q9UBV4 365 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 RALGAPA1Q6GYQ0 2036 aa9.1□□□□□ -0.95
APLF-202ENST00000394342 P4HA2O15460 535 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 CILPO75339 1184 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 MBD3O95983 291 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 F11P03951 625 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 CETN1Q12798 172 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
APLF-202ENST00000394342 GPR158Q5T848 1215 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 SDHAF4Q5VUM1 108 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 TANGO2Q6ICL3 276 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.95
APLF-202ENST00000394342 DENND5BQ6ZUT9 1274 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 TMEM150AQ86TG1 271 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 ACOT1Q86TX2 421 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 TRIM59Q8IWR1 403 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 ZSCAN18Q8TBC5 510 aaPredicted RBP9.09□□□□□ -0.95
APLF-202ENST00000394342 DEPDC1BQ8WUY9 529 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 MRPS31Q92665 395 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms