RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SMARCA1P28370 1054 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FXR1P51114 621 aaKnown RBP eCLIP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 LILRA4P59901 499 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 GPSM2P81274 684 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ERV3-1Q14264 604 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CYP1B1Q16678 543 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 LY6KQ17RY6 165 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CERKLQ49MI3 558 aaPredicted RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 AWAT1Q58HT5 328 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 L1TD1Q5T7N2 865 aaKnown RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM160B1Q5W0V3 765 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SFRP4Q6FHJ7 346 aaPredicted RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PPP4R3AQ6IN85 833 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 LVRNQ6Q4G3 990 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF813Q6ZN06 617 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 USP43Q70EL4 1123 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 KRT26Q7Z3Y9 468 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SLC15A3Q8IY34 581 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF548Q8NEK5 533 aaPredicted RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CUL5Q93034 780 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 LYZL4Q96KX0 146 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TEKT5Q96M29 485 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SNX18Q96RF0 628 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SIK2Q9H0K1 926 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 MAN1C1Q9NR34 630 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TMEM184CQ9NVA4 438 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 NDRG4Q9ULP0 352 aaKnown RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 GABRQQ9UN88 632 aa2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 MRPS17Q9Y2R5 130 aaKnown RBP2.08□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM90A8PA6NJQ4 464 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SMAD6O43541 496 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 XPOTO43592 962 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 A1BGP04217 495 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 RPLP2P05387 115 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CSF1RP07333 972 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 VIL1P09327 827 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM90A13PP0C7W8 464 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM90A24PP0C7X0 464 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TGFB3P10600 412 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PIM1P11309 404 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ADORA2AP29274 412 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 KCNJ5P48544 419 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PXNP49023 591 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PSG6Q00889 435 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF268Q14587 947 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SEC23BQ15437 767 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 NPY5RQ15761 445 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ABCB5Q2M3G0 1257 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 UAP1L1Q3KQV9 507 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TBC1D25Q3MII6 688 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 LONRF3Q496Y0 759 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 UBAP2Q5T6F2 1119 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 RGS7BPQ6MZT1 257 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 Q6ZTC4 211 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 BCDIN3DQ7Z5W3 292 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF280BQ86YH2 543 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 C3orf20Q8ND61 904 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ABHD11Q8NFV4 315 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ATL2Q8NHH9 583 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF398Q8TD17 642 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SIGLEC11Q96RL6 698 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 MMS19Q96T76 1030 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM118BQ9BPY3 351 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PTDSS2Q9BVG9 487 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CIPCQ9C0C6 399 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CCDC8Q9H0W5 538 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 GLOD4Q9HC38 313 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 GNL3LQ9NVN8 582 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SLC5A4Q9NY91 659 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 HEY2Q9UBP5 337 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ABCF2Q9UG63 623 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CCNL1Q9UK58 526 aaPredicted RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZDHHC8Q9ULC8 765 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PROCRQ9UNN8 238 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PCDHA1Q9Y5I3 950 aa2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CFAP20Q9Y6A4 193 aaKnown RBP2.07□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TLDC2A0PJX2 215 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 UBE2Q2LH0YL09 131 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 AP4M1O00189 453 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 DSCR3O14972 297 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 USP1O94782 785 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TOMM40O96008 361 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CRYABP02511 175 aaKnown RBP2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CHRM5P08912 532 aaPredicted RBP2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 MYBL2P10244 700 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PSG1P11464 419 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CPEP16870 476 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 CNGA1P29973 690 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 PPIFP30405 207 aaKnown RBP2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZNF91Q05481 1191 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 EXOSC9Q06265 439 aaKnown RBP2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 NOGQ13253 232 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 SEMA3AQ14563 771 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 IQCB1Q15051 598 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 FAM187BQ17R55 369 aa2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 ZIK1Q3SY52 487 aaPredicted RBP2.06□□□□□ -2.08
RNU6-1228P-201ENST00000391014 TMEM63BQ5T3F8 832 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms