RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RALAP11233 206 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 MLH1P40692 756 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 GSTM4Q03013 218 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 BBS5Q8N3I7 341 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 OLFML3Q9NRN5 406 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 CLRN2A0PK11 232 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 SFI1A8K8P3 1242 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 ZBTB5O15062 677 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 BGNP21810 368 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 GJA8P48165 433 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 CYP2J2P51589 502 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 TLR1Q15399 786 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 EFHC1Q5JVL4 640 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 SLFN13Q68D06 897 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 Q6ZNX1 250 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 TMC7Q7Z402 723 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 SIAH1Q8IUQ4 282 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 MARVELD2Q8N4S9 558 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 RIN3Q8TB24 985 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 VTI1AQ96AJ9 217 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 ALKBH8Q96BT7 664 aaKnown RBP15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 KLF6Q99612 283 aaPredicted RBP15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 BRD8Q9H0E9 1235 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 C1orf21Q9H246 121 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 PPARGC1AQ9UBK2 798 aaKnown RBP15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.05
VPS9D1-201ENST00000389386 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 E5RJQ4 531 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 CYP26A1O43174 497 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 TRMUO75648 421 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 FDX1P10109 184 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 CPA3P15088 417 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 PORP16435 677 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 STIP1P31948 543 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 GPX6P59796 221 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 FMO1Q01740 532 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 PPIDQ08752 370 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 SPIRE1Q08AE8 756 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 ADRM1Q16186 407 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 STRIP1Q5VSL9 837 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 GSTA5Q7RTV2 222 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 GLIS1Q8NBF1 620 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 ZFRQ96KR1 1074 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 PFDN4Q9NQP4 134 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 KCNK4Q9NYG8 393 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 RABGEF1Q9UJ41 708 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 PCDHA1Q9Y5I3 950 aa15.33■□□□□ 0.04
VPS9D1-201ENST00000389386 ARFGEF1Q9Y6D6 1849 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 ARHGAP10A1A4S6 786 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 BIRC5O15392 142 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 RPA1P27694 616 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 CPOXP36551 454 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 ETV4P43268 484 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 TGFB2P61812 414 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 NOP14P78316 857 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 EFTUD2Q15029 972 aaKnown RBP eCLIP15.32■□□□□ 0.044e-7■■■■■ 30.4
VPS9D1-201ENST00000389386 ADGRD1Q6QNK2 874 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PASD1Q8IV76 773 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 KAT5Q92993 513 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 GRIP2Q9C0E4 1043 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 UBAP1Q9NZ09 502 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 COL4A5P29400 1685 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 KANSL1LA0AUZ9 987 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 DENRO43583 198 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PEX1O43933 1283 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PDE5AO76074 875 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 CCNIQ14094 377 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 CCDC92Q53HC0 331 aaPredicted RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PRPF39Q86UA1 669 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 SLC15A3Q8IY34 581 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PRPF31Q8WWY3 499 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PHF12Q96QT6 1004 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 DHRS4Q9BTZ2 278 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 MRPS26Q9BYN8 205 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 PI4KBQ9UBF8 816 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 FETUBQ9UGM5 382 aa15.32■□□□□ 0.04
VPS9D1-201ENST00000389386 MAPK4P31152 587 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 FDFT1P37268 417 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 BFSP1Q12934 665 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 LPIN1Q14693 890 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 TRIP10Q15642 601 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 BORAQ6PGQ7 559 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 ICA1LQ8NDH6 482 aa15.31■□□□□ 0.04
VPS9D1-201ENST00000389386 SLC26A7Q8TE54 656 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms