RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 CCDC188H7C350 402 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 CES2O00748 559 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 HPDP32754 393 aaPredicted RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 YWHAEP62258 255 aaKnown RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 TUBB4BP68371 445 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 ADAM32Q8TC27 787 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.75e-7■□□□□ 10.9
LTN1-203ENST00000389195 DDX23Q9BUQ8 820 aaKnown RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 TMEM30AQ9NV96 361 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 KIAA0100Q14667 2235 aaKnown RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 PDGFRAP16234 1089 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 MIPP30301 263 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 BRCC3P46736 316 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 GJA9P57773 515 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 ENPEPQ07075 957 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 IFRD2Q12894 506 aaPredicted RBP10.7□□□□□ -0.7
LTN1-203ENST00000389195 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 ODF2Q5BJF6 829 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 CFAP58Q5T655 872 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 TRIM72Q6ZMU5 477 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 AGMOQ6ZNB7 445 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 GSTA5Q7RTV2 222 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 BEST2Q8NFU1 509 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 RXFP2Q8WXD0 754 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 FAM105AQ9NUU6 356 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 PCDHGC3Q9UN70 934 aa10.7□□□□□ -0.7
LTN1-203ENST00000389195 ARL5CA6NH57 179 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 PAPSS1O43252 624 aaPredicted RBP10.69□□□□□ -0.7
LTN1-203ENST00000389195 B4GALT3O60512 393 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 CALB1P05937 261 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 MYBL1P10243 752 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 GDF10P55107 478 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 BCAR1P56945 870 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 CA9Q16790 459 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 IQCKQ8N0W5 287 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 MRRFQ96E11 262 aaKnown RBP10.69□□□□□ -0.7
LTN1-203ENST00000389195 FAM81BQ96LP2 452 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 SLITRK1Q96PX8 696 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 ZDHHC18Q9NUE0 388 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 CNTN3Q9P232 1028 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 IP6K2Q9UHH9 426 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 TET1Q8NFU7 2136 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 PIRO00625 290 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 FSCN2O14926 492 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 ACSL3O95573 720 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 MCM3P25205 808 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 PBX3P40426 434 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 ADCY1Q08828 1119 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 TCEAL1Q15170 157 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 CNGA2Q16280 664 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 PPP6R3Q5H9R7 873 aaPredicted RBP10.69□□□□□ -0.7
LTN1-203ENST00000389195 EMBQ6PCB8 327 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 FOXR1Q6PIV2 292 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 ZC3H18Q86VM9 953 aaKnown RBP10.69□□□□□ -0.7
LTN1-203ENST00000389195 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 TMEM209Q96SK2 561 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 FMO2Q99518 471 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 ADAM2Q99965 735 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 DCLK3Q9C098 648 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 SLITRK6Q9H5Y7 841 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 SCINQ9Y6U3 715 aa10.69□□□□□ -0.7
LTN1-203ENST00000389195 MYBPHLA2RUH7 354 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 CYB561D2O14569 222 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 ATP8B1O43520 1251 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 HSF2BPO75031 334 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 VDRP11473 427 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 PECAM1P16284 738 aaPredicted RBP10.68□□□□□ -0.7
LTN1-203ENST00000389195 ADCY8P40145 1251 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 KLF1Q13351 362 aaPredicted RBP10.68□□□□□ -0.7
LTN1-203ENST00000389195 ITGA7Q13683 1181 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 TMC3Q7Z5M5 1100 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 RAET1EQ8TD07 263 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 B3GALT6Q96L58 329 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 MTUS1Q9ULD2 1270 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 ZNF148Q9UQR1 794 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.68□□□□□ -0.7
LTN1-203ENST00000389195 MFHAS1Q9Y4C4 1052 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 M0QZ92 97 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 MED7O43513 233 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 CST8O60676 142 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 P4HA1P13674 534 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 SLC25A11Q02978 314 aaKnown RBP10.68□□□□□ -0.7
LTN1-203ENST00000389195 INCA1Q0VD86 236 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 CCDC38Q502W7 563 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 C1orf228Q6PIY5 440 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 ADGRF2Q8IZF7 708 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 PYROXD2Q8N2H3 581 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 APPL2Q8NEU8 664 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 TRIM11Q96F44 468 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
LTN1-203ENST00000389195 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms