RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 C4BPAP04003 597 aaKnown RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 SKIP12755 728 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 GM2AP17900 193 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 VHLP40337 213 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 INHBEP58166 350 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 FMO1Q01740 532 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CDR2Q01850 454 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 DNAJC3Q13217 504 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CCNG2Q16589 344 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 MUM1Q2TAK8 710 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 GJC2Q5T442 439 aaPredicted RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 FYB2Q5VWT5 728 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CWF19L1Q69YN2 538 aaKnown RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 ZBTB10Q96DT7 871 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 MAML3Q96JK9 1138 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 SMC6Q96SB8 1091 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CGRRF1Q99675 332 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 ACO2Q99798 780 aaKnown RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 RNPEPQ9H4A4 650 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 CHST7Q9NS84 486 aa9.4□□□□□ -0.91
GPNMB-202ENST00000381990 ZMYND8Q9ULU4 1186 aaPredicted RBP9.4□□□□□ -0.91
GPNMB-202ENST00000381990 EXOC1LA0A1B0GW35 172 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 NVLO15381 856 aaKnown RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 C22orf31O95567 290 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 T-ENOLP0DO92 83 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 WNT7BP56706 349 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 OCRLQ01968 901 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ZBTB41Q5SVQ8 909 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 EFCAB12Q6NXP0 572 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 RHPN2Q8IUC4 686 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 BRSK2Q8IWQ3 736 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 AFG1LQ8WV93 481 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 C10orf82Q8WW14 230 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TRIM11Q96F44 468 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TRAPPC9Q96Q05 1148 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TCHPQ9BT92 498 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 CNTNAP2Q9UHC6 1331 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 SLC15A5A6NIM6 579 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TTLL13PA6NNM8 815 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 HGSO14964 777 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 CCDC22O60826 627 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 MYBL1P10243 752 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 INSRRP14616 1297 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 CYP11B1P15538 503 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 EPHB2P29323 1055 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 PIK3CAP42336 1068 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 MAGEA4P43358 317 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 SNX1Q13596 522 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TMED2Q15363 201 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 PDCD2Q16342 344 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 THEMIS2Q5TEJ8 643 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 LMBRD2Q68DH5 695 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ACAD10Q6JQN1 1059 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 TEKT4Q8WW24 435 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 FAM136AQ96C01 138 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 RBM15Q96T37 977 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 PI4K2AQ9BTU6 479 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ABHD16BQ9H3Z7 469 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 DENND2DQ9H6A0 471 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPNMB-202ENST00000381990 SCOCQ9UIL1 159 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 PTPRJQ12913 1337 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF236Q9UL36 1845 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 COL1A2P08123 1366 aa9.39□□□□□ -0.91
GPNMB-202ENST00000381990 ACKR2O00590 384 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 OGTO15294 1046 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 FAM189A1O60320 539 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 CLCN3P51790 818 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 AP3M2P53677 418 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 MCL1Q07820 350 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 GRM1Q13255 1194 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 KLF1Q13351 362 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 CST9Q5W186 159 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 TMEM154Q6P9G4 183 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 SLC47A2Q86VL8 602 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF333Q96JL9 665 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 FAM84AQ96KN4 292 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 NFKBIZQ9BYH8 718 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 MMADHCQ9H3L0 296 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 FZD8Q9H461 694 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms