RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 ALDH2P05091 517 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 TYMPP19971 482 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 GATMP50440 423 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 PEX5P50542 639 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 GSCP56915 257 aaPredicted RBP15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 RNASE9P60153 205 aaKnown RBP15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 BST2Q10589 180 aaKnown RBP15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 KIAA0319Q5VV43 1072 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 OR6B2Q6IFH4 312 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 CNKSR3Q6P9H4 555 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 TMEM110Q86TL2 294 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 NPAS4Q8IUM7 802 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 THEM5Q8N1Q8 247 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 CD101Q93033 1021 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 SYT15Q9BQS2 421 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 NRDE2Q9H7Z3 1164 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 CRTAC1Q9NQ79 661 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 EHD2Q9NZN4 543 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 ZMYND8Q9ULU4 1186 aaPredicted RBP15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 PCDHB8Q9UN66 801 aa15.32■□□□□ 0.04
SYNGR1-204ENST00000381535 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 TMEM189-UBE2V1I3L0A0 370 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 TULP2O00295 520 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 PIK3R2O00459 728 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 TIMP1P01033 207 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 ITGB1P05556 798 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 PCSK1P29120 753 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 BCAT1P54687 386 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 CRIPAKQ8N1N5 446 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 RASGEF1CQ8N431 466 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 ACTRT1Q8TDG2 376 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 KRT35Q92764 455 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 MCEEQ96PE7 176 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 ACBD6Q9BR61 282 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 COLEC11Q9BWP8 271 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 SMARCAL1Q9NZC9 954 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 USTQ9Y2C2 406 aa15.31■□□□□ 0.04
SYNGR1-204ENST00000381535 MYBPHLA2RUH7 354 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 E5RJQ4 531 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 F8W810 466 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 CLDN5O00501 218 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 NRP1O14786 923 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 TRAPPC3O43617 180 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 SYN1P17600 705 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 TKTP29401 623 aaKnown RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 MAN1A1P33908 653 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 CTNNA1P35221 906 aaKnown RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 RFC1P35251 1148 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 ACADSBP45954 432 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 TTC3P53804 2025 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 SLC8A3P57103 927 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 ITIH3Q06033 890 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 PIGHQ14442 188 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 OVOS1Q6IE37 1185 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 PAQR9Q6ZVX9 377 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 JOSD2Q8TAC2 188 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 MYCBPAPQ8TBZ2 947 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 ALG3Q92685 438 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 VWCEQ96DN2 955 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 RTP3Q9BQQ7 232 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 CARD9Q9H257 536 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 CYLDQ9NQC7 956 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 PRDM5Q9NQX1 630 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 METTL5Q9NRN9 209 aaKnown RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 PRG3Q9Y2Y8 225 aaPredicted RBP15.3■□□□□ 0.04
SYNGR1-204ENST00000381535 LAMA2P24043 3122 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 GABBR2O75899 941 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 UPP2O95045 317 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 PSMA2P25787 234 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 SSR1P43307 286 aaKnown RBP15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 RWDD2BP57060 319 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 SLC6A3Q01959 620 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 OGDHQ02218 1023 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
SYNGR1-204ENST00000381535 ELF2Q15723 593 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms