RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 USP13Q92995 863 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-202ENST00000381208 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 ZFYVE19Q96K21 471 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 MMS19Q96T76 1030 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 CGRRF1Q99675 332 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 GKN1Q9NS71 199 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 COL4A2P08572 1712 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 TRIM66O15016 1216 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 ATG13O75143 517 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 MYL1P05976 194 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 USP17L7P0C7H9 530 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 ANXA13P27216 316 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 SOX9P48436 509 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 CYP24A1Q07973 514 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPAIN-202ENST00000381208 TRPC3Q13507 836 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 CCINQ13939 588 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 PUM1Q14671 1186 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPAIN-202ENST00000381208 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
RPAIN-202ENST00000381208 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-202ENST00000381208 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 KIAA1958Q8N8K9 716 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-202ENST00000381208 SNX25Q9H3E2 840 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 TICRRQ7Z2Z1 1910 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 PTPRJQ12913 1337 aa13.88□□□□□ -0.19
RPAIN-202ENST00000381208 WDR87Q6ZQQ6 2873 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 PRR5-ARHGAP8B1AHC4 643 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
RPAIN-202ENST00000381208 EXOC3O60645 756 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 LRP3O75074 770 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 CKMP06732 381 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 SLFN14P0C7P3 912 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TCF3P15923 654 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-202ENST00000381208 GPR15P49685 360 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 CYP2J2P51589 502 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TNNC1P63316 161 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 ARHGAP8P85298 464 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 SATB1Q01826 763 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 LMNB2Q03252 620 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TNK2Q07912 1038 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 NR1H3Q13133 447 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 PSMD2Q13200 908 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 GAS6Q14393 721 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 KCNB1Q14721 858 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 PON2Q15165 354 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 FBXO43Q4G163 708 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-202ENST00000381208 LAIR1Q6GTX8 287 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 NELFCDQ8IXH7 590 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 MYCBPAPQ8TBZ2 947 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-202ENST00000381208 SMG9Q9H0W8 520 aaKnown RBP13.87□□□□□ -0.19
RPAIN-202ENST00000381208 CACNA1AO00555 2505 aa13.87□□□□□ -0.19
RPAIN-202ENST00000381208 CCDC163A0A0D9SF12 145 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 CLIC2O15247 247 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 FOXD2O60548 495 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-202ENST00000381208 KIF20AO95235 890 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 DRD1P21728 446 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 LMO2P25791 158 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 GRIK1P39086 918 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 CDR1P51861 262 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 MTF1Q14872 753 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 TMEM196Q5HYL7 178 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 DENND5BQ6ZUT9 1274 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 DCLK2Q8N568 766 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 OSCP1Q8WVF1 389 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 ATP2A3Q93084 1043 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 MYLPFQ96A32 169 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 CCDC127Q96BQ5 260 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 C8orf48Q96LL4 319 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 ELOVL4Q9GZR5 314 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 EBF3Q9H4W6 596 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 HPS4Q9NQG7 708 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
RPAIN-202ENST00000381208 EXOC1Q9NV70 894 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 CCL26Q9Y258 94 aa13.86□□□□□ -0.19
RPAIN-202ENST00000381208 PHACTR2O75167 634 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 TADA3O75528 432 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 CST3P01034 146 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms