RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PRKCQQ04759 706 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 SYTL1Q8IYJ3 562 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 RIBC1Q8N443 379 aaPredicted RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 FAM45AQ8TCE6 357 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 ZC3H10Q96K80 434 aaKnown RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 LRRC1Q9BTT6 524 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 BIRC5O15392 142 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PALMO75781 387 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 LPIN1Q14693 890 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 STAT4Q14765 748 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 RBM20Q5T481 1227 aaKnown RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 KIAA0408Q6ZU52 694 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PRPF39Q86UA1 669 aaKnown RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 MAGEC3Q8TD91 643 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 EHD1Q9H4M9 534 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 VPS4AQ9UN37 437 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PCDHB7Q9Y5E2 793 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 MYO1GB0I1T2 1018 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PTPN4P29074 926 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 GNA15P30679 374 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 SFNP31947 248 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 DLG4P78352 724 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 PERM1Q5SV97 790 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 ERICH5Q6P6B1 374 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 CLEC10AQ8IUN9 316 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 FAM118BQ9BPY3 351 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 KLK14Q9P0G3 267 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 DDX20Q9UHI6 824 aaKnown RBP11.18□□□□□ -0.62
CLCN4-202ENST00000380833 ITIH6Q6UXX5 1313 aa11.18□□□□□ -0.62
CLCN4-202ENST00000380833 MAGEA2P43356 314 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 OCLNQ16625 522 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TRMT5Q32P41 509 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 RERGLQ9H628 205 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 CYP39A1Q9NYL5 469 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MLH3Q9UHC1 1453 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 VAV1P15498 845 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MZF1P28698 734 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 C11orf88Q6PI97 169 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 BNIPLQ7Z465 357 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 GALNT15Q8N3T1 639 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 SPATA4Q8NEY3 305 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 FNIP1Q8TF40 1166 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ASB12Q8WXK4 309 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ABHD10Q9NUJ1 306 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 JCADQ9P266 1359 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 PRELPP51888 382 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ARL4CP56559 192 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TRAF3Q13114 568 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TCHHL1Q5QJ38 904 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF658Q5TYW1 1059 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 RBM44Q6ZP01 1051 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 S100PBPQ96BU1 408 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TUBGCP5Q96RT8 1024 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 COA1Q9GZY4 146 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 USE1Q9NZ43 259 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 SLC25A13Q9UJS0 675 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 RAD51Q06609 339 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 DNAJC3Q13217 504 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 C5orf22Q49AR2 442 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MEI1Q5TIA1 1274 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 TMEM179Q6ZVK1 233 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MSR1P21757 451 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 RPL5P46777 297 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 DGKKQ5KSL6 1271 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 HEATR6Q6AI08 1181 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 PPP1R2P3Q6NXS1 205 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 POC5Q8NA72 575 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ING3Q9NXR8 418 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 A0A087WXM4 84 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF263O14978 683 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 MYO1DO94832 1006 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 VDRP11473 427 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 NPR2P20594 1047 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 ANGEL2Q5VTE6 544 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 P3H2Q8IVL5 708 aa11.17□□□□□ -0.62
CLCN4-202ENST00000380833 WDR12Q9GZL7 423 aaKnown RBP11.17□□□□□ -0.62
CLCN4-202ENST00000380833 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PDLIM1O00151 329 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CCRL2O00421 344 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TLR2O60603 784 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 UBOX5O94941 541 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms