RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TRPM5Q9NZQ8 1165 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 PRLRP16471 622 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 LRRC55Q6ZSA7 311 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 SLC9A9Q8IVB4 645 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 RXFP2Q8WXD0 754 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 RPRD1AQ96P16 312 aaPredicted RBP22.12■■□□□ 1.13
SKI-201ENST00000378536 NUF2Q9BZD4 464 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 USP18Q9UMW8 372 aa22.12■■□□□ 1.13
SKI-201ENST00000378536 LOC102724159A0A0B4J2E5 919 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 STIP1P31948 543 aaKnown RBP22.11■■□□□ 1.13
SKI-201ENST00000378536 ITGA8P53708 1063 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 TBX2Q13207 712 aaPredicted RBP22.11■■□□□ 1.13
SKI-201ENST00000378536 PWP2Q15269 919 aaKnown RBP22.11■■□□□ 1.13
SKI-201ENST00000378536 ADRB2P07550 413 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 CLEC4DQ8WXI8 215 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 PCDHB5Q9Y5E4 795 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 PCSK7Q16549 785 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 EMC1Q8N766 993 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 G3BP2Q9UN86 482 aaKnown RBP22.11■■□□□ 1.13
SKI-201ENST00000378536 BMP6P22004 513 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 CDH8P55286 799 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 GAD1Q99259 594 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 ISCUQ9H1K1 167 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 CNTNAP2Q9UHC6 1331 aa22.11■■□□□ 1.13
SKI-201ENST00000378536 F5H5T6 163 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 MICAL2O94851 1124 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 CCNE2O96020 404 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 MBL2P11226 248 aaPredicted RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 LMNTD2Q8IXW0 634 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 C9orf72Q96LT7 481 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 LRGUKQ96M69 825 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 HACD3Q9P035 362 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ZMYM2Q9UBW7 1377 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 NOL3O60936 208 aaKnown RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 CASP2P42575 452 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 EPHB3P54753 998 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 PTENP60484 403 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 BTG3Q14201 252 aaPredicted RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 DBN1Q16643 649 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 PPIL6Q8IXY8 311 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 NDFIP2Q9NV92 336 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 SENP1Q9P0U3 644 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 GYS2P54840 703 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 FAM171A1Q5VUB5 890 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 C11orf63Q6NUN7 778 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ATXN7L3BQ96GX2 97 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ELAC2Q9BQ52 826 aaKnown RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 COL1A1P02452 1464 aaPredicted RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 H0Y626 953 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 BMT2Q1RMZ1 405 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ZDHHC17Q8IUH5 632 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 CNPY4Q8N129 248 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 NOA1Q8NC60 698 aaKnown RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 VCPIP1Q96JH7 1222 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 MLXIPLQ9NP71 852 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 COL1A2P08123 1366 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 ZNF177Q13360 481 aaPredicted RBP22.1■■□□□ 1.13
SKI-201ENST00000378536 CDH18Q13634 790 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 PHLDB3Q6NSJ2 640 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 FAM47EQ6ZV65 393 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 SMARCD1Q96GM5 515 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 TXLNGQ9NUQ3 528 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 AP4E1Q9UPM8 1137 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 SIK3Q9Y2K2 1263 aa22.1■■□□□ 1.13
SKI-201ENST00000378536 ETFBP38117 255 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 HSDL1Q3SXM5 330 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 COBLL1Q53SF7 1204 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 IPMKQ8NFU5 416 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 CDT1Q9H211 546 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 FAM96AQ9H5X1 160 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 A0A0G2JND7 137 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 MMP3P08254 477 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 CLK2P49760 499 aaKnown RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 LIG3P49916 1009 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 ZNF268Q14587 947 aaPredicted RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 TBC1D1Q86TI0 1168 aaPredicted RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 SPDYE1Q8NFV5 336 aaPredicted RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 MCL1Q07820 350 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 EFEMP1Q12805 493 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 ARSHQ5FYA8 562 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 TMC7Q7Z402 723 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 CCNYL1Q8N7R7 359 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 CRYBB1P53674 252 aaPredicted RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 FAM133BQ5BKY9 247 aaKnown RBP22.09■■□□□ 1.13
SKI-201ENST00000378536 LRIG3Q6UXM1 1119 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 EXD1Q8NHP7 514 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 GPATCH2LQ9NWQ4 482 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 GTSE1Q9NYZ3 720 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 COL20A1Q9P218 1284 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 CHMP2BQ9UQN3 213 aa22.09■■□□□ 1.13
SKI-201ENST00000378536 KCNA2P16389 499 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 RABGAP1LQ5R372 815 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 MEI1Q5TIA1 1274 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 PAPD7Q5XG87 772 aaKnown RBP22.08■■□□□ 1.13
SKI-201ENST00000378536 FAM131BQ86XD5 332 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 BAG5Q9UL15 447 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 SPAG6O75602 509 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 DNAJB2P25686 324 aa22.08■■□□□ 1.13
SKI-201ENST00000378536 MLH1P40692 756 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms