RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 L3MBTL1Q9Y468 752 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 STRNO43815 780 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 LY6KQ17RY6 165 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 USP33Q8TEY7 942 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 TATDN2Q93075 761 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 WWP1Q9H0M0 922 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 SMAPO00193 183 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 GPR182O15218 404 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 INSRRP14616 1297 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 LAMTOR4Q0VGL1 99 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 MAPRE1Q15691 268 aaKnown RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 TAS2R42Q7RTR8 314 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 NOP9Q86U38 636 aaKnown RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 SH3TC2Q8TF17 1288 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 MTIF3Q9H2K0 278 aaKnown RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 KCNMB3Q9NPA1 279 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 TISP43B9A030 160 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 PSMD3O43242 534 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 CUL3Q13618 768 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 AMHR2Q16671 573 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 TSSK1BQ9BXA7 367 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 CYP4F11Q9HBI6 524 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 GDF3Q9NR23 364 aa15.65■□□□□ 0.1
NPHP4-201ENST00000378156 MARCOQ9UEW3 520 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 LSM7Q9UK45 103 aaKnown RBP15.65■□□□□ 0.1
NPHP4-201ENST00000378156 KIF1AQ12756 1690 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 PDHXO00330 501 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 PRRG1O14668 218 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 CYBBP04839 570 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 KRT4P19013 534 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ACOT1Q86TX2 421 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 FAM71DQ8N9W8 422 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 CLMNQ96JQ2 1002 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 MOSPD1Q9UJG1 213 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ARHGAP26Q9UNA1 814 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 SYF2O95926 243 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 CYP3A4P08684 503 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 KCNA4P22459 653 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 LVRNQ6Q4G3 990 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 SPIRE2Q8WWL2 714 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 KRT35Q92764 455 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ASCC2Q9H1I8 757 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 A1CFQ9NQ94 594 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ADM5C9JUS6 153 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 MYL6P60660 151 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 CNTN2Q02246 1040 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 WDR49Q8IV35 697 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 PPHLN1Q8NEY8 458 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 TRPC7Q9HCX4 862 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 MEIS2O14770 477 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 PTPRAP18433 802 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ACO1P21399 889 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF200P98182 395 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF844Q08AG5 666 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ORC1Q13415 861 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 SNX17Q15036 470 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 MDH1BQ5I0G3 518 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 TMC3Q7Z5M5 1100 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 AGR3Q8TD06 166 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 SLITRK1Q96PX8 696 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF518BQ9C0D4 1074 aa15.64■□□□□ 0.09
NPHP4-201ENST00000378156 PAIP2BQ9ULR5 123 aaKnown RBP15.64■□□□□ 0.09
NPHP4-201ENST00000378156 E2F6O75461 281 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 ALDH5A1P51649 535 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PTK7Q13308 1070 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 KCNT1Q5JUK3 1230 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 APLFQ8IW19 511 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 RANBP17Q9H2T7 1088 aaKnown RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 HACD3Q9P035 362 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 SATB2Q9UPW6 733 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 CSDE1O75534 798 aaKnown RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PYGMP11217 842 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 KDSRQ06136 332 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PPATQ06203 517 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 ECM1Q16610 540 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 UGP2Q16851 508 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 SLC26A7Q8TE54 656 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 EGFL8Q99944 293 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 CISHQ9NSE2 258 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PGM1P36871 562 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 MRPS35P82673 323 aaKnown RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 RABGAP1LQ5R372 815 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 C11orf63Q6NUN7 778 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PPCSQ9HAB8 311 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 STX18Q9P2W9 335 aaKnown RBP15.63■□□□□ 0.09
NPHP4-201ENST00000378156 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 FRMPD4Q14CM0 1322 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 PSTPIP1O43586 416 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 APOA1P02647 267 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 ODC1P11926 461 aa15.63■□□□□ 0.09
NPHP4-201ENST00000378156 MED21Q13503 144 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms