RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 PPFIBP2Q8ND30 876 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 TTC1Q99614 292 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 COL20A1Q9P218 1284 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 LPXNO60711 386 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 DNAJC6O75061 913 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 BAG2O95816 211 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 P4HBP07237 508 aaKnown RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 GSTA2P09210 222 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 MAPTP10636 758 aaKnown RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 ANPEPP15144 967 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 NOMO3P69849 1222 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 MCL1Q07820 350 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 SPOCD1Q6ZMY3 1216 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 RBM15BQ8NDT2 890 aaKnown RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 DHRS4Q9BTZ2 278 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 ZNF212Q9UDV6 495 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 PPM1HQ9ULR3 514 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 FAM155BO75949 473 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 NPTX2P47972 431 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 KDSRQ06136 332 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 CUL3Q13618 768 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 CDHR3Q6ZTQ4 885 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 CACTIN-AS1Q8N1I8 211 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 CPT1BQ92523 772 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 MFSD14AQ96MC6 490 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 VPS11Q9H270 941 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 DBNDD1Q9H9R9 158 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
TM9SF2-201ENST00000376387 KRT38O76015 456 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 ETV4P43268 484 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 IWS1Q96ST2 819 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 RSPH9Q9H1X1 276 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 AASDHPPTQ9NRN7 309 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 MTO1Q9Y2Z2 717 aaKnown RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 TMEM63AO94886 807 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 PSMC5P62195 406 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 GCNT1Q02742 428 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 LMNB2Q03252 620 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 PTK7Q13308 1070 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 LRRC36Q1X8D7 754 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 BBS9Q3SYG4 887 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 PLEKHA7Q6IQ23 1121 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 TMEM270Q6UE05 265 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 ARHGAP22Q7Z5H3 698 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 DRAXINQ8NBI3 349 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 VMP1Q96GC9 406 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 SSU72Q9NP77 194 aaKnown RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 UTP6Q9NYH9 597 aaKnown RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 MARCOQ9UEW3 520 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-201ENST00000376387 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 KITP10721 976 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 FAAP100Q0VG06 881 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 KRT72Q14CN4 511 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 DLGAP5Q15398 846 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 FAAH2Q6GMR7 532 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 RBM41Q96IZ5 413 aaKnown RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 THTPAQ9BU02 230 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 ASCC2Q9H1I8 757 aaPredicted RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 ACSS3Q9H6R3 686 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 APOBEC3GQ9HC16 384 aaKnown RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 MRGBPQ9NV56 204 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 CHMP2BQ9UQN3 213 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 LOXHD1Q8IVV2 1947 aa12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.48
TM9SF2-201ENST00000376387 hCG_1818297A0A087WSY0 165 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 TRIM64CA6NLI5 447 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 MEI4A8MW99 385 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 TM9SF1O15321 606 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 SORBS2O94875 1100 aaKnown RBP12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 LIN9Q5TKA1 542 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 CEP128Q6ZU80 1094 aa12.02□□□□□ -0.49
TM9SF2-201ENST00000376387 RCOR2Q8IZ40 523 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms