RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 FBP2O00757 339 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 SGPL1O95470 568 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 RALAP11233 206 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 RAG1P15918 1043 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 PAX3P23760 479 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 ETV4P43268 484 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 MYBPC1Q00872 1141 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 PFKPQ01813 784 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 OGFRL1Q5TC84 451 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-201ENST00000374198 DHRS4L2Q6PKH6 230 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 RIOX1Q9H6W3 641 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 SMYD3Q9H7B4 428 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 FETUBQ9UGM5 382 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 ATRNL1Q5VV63 1379 aa13.5□□□□□ -0.25
PRPF4-201ENST00000374198 MEI4A8MW99 385 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 PRR5-ARHGAP8B1AHC4 643 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 MEIS1O00470 390 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 LPXNO60711 386 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 NTSR2O95665 410 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 SERPINB6P35237 376 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ARHGAP8P85298 464 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 MTMR2Q13614 643 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 EFTUD2Q15029 972 aaKnown RBP eCLIP13.49□□□□□ -0.252e-10■■■■□ 21.3
PRPF4-201ENST00000374198 NFIL3Q16649 462 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 CAVIN4Q5BKX8 364 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ZNF362Q5T0B9 420 aaPredicted RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 SLC44A5Q8NCS7 719 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 PRPF18Q99633 342 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 APPL1Q9UKG1 709 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 STRIP2Q9ULQ0 834 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 DNM3Q9UQ16 869 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 MAD1L1Q9Y6D9 718 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 P4HA2O15460 535 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 GPX6P59796 221 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 SLC25A3Q00325 362 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 VTI1AQ96AJ9 217 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 BIRC8Q96P09 236 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 WWP1Q9H0M0 922 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 TUT1Q9H6E5 874 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 KIAA1522Q9P206 1035 aaPredicted RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 HEMK1Q9Y5R4 338 aaPredicted RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 KLF11O14901 512 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ZBED1O96006 694 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 PDGFRBP09619 1106 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 FDX1P10109 184 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 STT3AP46977 705 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
PRPF4-201ENST00000374198 RAB15P59190 212 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 CLEC16AQ2KHT3 1053 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 SYCP2LQ5T4T6 812 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 IYDQ6PHW0 289 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 POTEHQ6S545 545 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 COX4I2Q96KJ9 171 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 PAFAH2Q99487 392 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 CCT7Q99832 543 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 DHRS4Q9BTZ2 278 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 RRN3Q9NYV6 651 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 CNTN3Q9P232 1028 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 RAB26Q9ULW5 256 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
PRPF4-201ENST00000374198 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ATP2A1O14983 1001 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
PRPF4-201ENST00000374198 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 NPR1P16066 1061 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 MAPK4P31152 587 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 COG2Q14746 738 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 C16orf72Q14CZ0 275 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 BCL2A1Q16548 175 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 TRIM50Q86XT4 487 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 GLIS1Q8NBF1 620 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 SNX27Q96L92 541 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 H3BNX3 289 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ITM2AO43736 263 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 PIAS1O75925 651 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 CRTAMO95727 393 aa13.48□□□□□ -0.25
PRPF4-201ENST00000374198 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
PRPF4-201ENST00000374198 ENTPD1P49961 510 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms