RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RNF40O75150 1001 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 LRCH4O75427 683 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 CABYRO75952 493 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 KRT7P08729 469 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 PPP1R7Q15435 360 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 CCNG2Q16589 344 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 SYDE1Q6ZW31 735 aaPredicted RBP26.3■■□□□ 1.8
CTSA-203ENST00000372459 TOP6BLQ8N6T0 577 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 CD99L2Q8TCZ2 262 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 ATG4AQ8WYN0 398 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 ZDHHC18Q9NUE0 388 aa26.3■■□□□ 1.8
CTSA-203ENST00000372459 PDGFRBP09619 1106 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 FGFR1P11362 822 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 PTPN7P35236 360 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 SLC25A11Q02978 314 aaKnown RBP26.29■■□□□ 1.8
CTSA-203ENST00000372459 TXNRD3NBQ6F5E7 133 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 MFSD7Q6UXD7 560 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 SPOCD1Q6ZMY3 1216 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 FAM183BPQ6ZVS7 135 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ANKS1BQ7Z6G8 1248 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 THSD7BQ9C0I4 1608 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 CENPFP49454 3210 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 TRPA1O75762 1119 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 RNF8O76064 485 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 TJP3O95049 919 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 MLH1P40692 756 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 RPL21P46778 160 aaKnown RBP26.29■■□□□ 1.8
CTSA-203ENST00000372459 RGS7P49802 495 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 PTK7Q13308 1070 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 MTMR3Q13615 1198 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ITGA7Q13683 1181 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ZSCAN26Q16670 478 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 PMF1Q6P1K2 205 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ADGRF2Q8IZF7 708 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ATL2Q8NHH9 583 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 STK32AQ8WU08 396 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 SLC35F5Q8WV83 523 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 SH3GL2Q99962 352 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 SLC4A5Q9BY07 1137 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 AGO3Q9H9G7 860 aaKnown RBP26.29■■□□□ 1.8
CTSA-203ENST00000372459 CREBZFQ9NS37 354 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 ASNSD1Q9NWL6 643 aa26.29■■□□□ 1.8
CTSA-203ENST00000372459 R3HDM2Q9Y2K5 976 aaKnown RBP26.29■■□□□ 1.8
CTSA-203ENST00000372459 ACTN2P35609 894 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 FLT3P36888 993 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 TFDP3Q5H9I0 405 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 ARFGAP1Q8N6T3 406 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 RAET1EQ8TD07 263 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 GRHL1Q9NZI5 618 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 NOD1Q9Y239 953 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 GIT1Q9Y2X7 761 aa26.28■■□□□ 1.8
CTSA-203ENST00000372459 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.28■■□□□ 1.8
CTSA-203ENST00000372459 LRRD1A4D1F6 860 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 MEIS3P2A8K0S8 358 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 PIK3R2O00459 728 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 WARSP23381 471 aaKnown RBP26.27■■□□□ 1.8
CTSA-203ENST00000372459 LMO2P25791 158 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 ZNF143P52747 638 aaPredicted RBP26.27■■□□□ 1.8
CTSA-203ENST00000372459 PLTPP55058 493 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 KRT17Q04695 432 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 ZNF618Q5T7W0 954 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 KAZNQ674X7 775 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 TMC3Q7Z5M5 1100 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 TMEM110Q86TL2 294 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 PIK3R5Q8WYR1 880 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 RAPGEF5Q92565 580 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 TNIP3Q96KP6 325 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 GAD1Q99259 594 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 FAM129AQ9BZQ8 928 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 PADI3Q9ULW8 664 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 TULP2O00295 520 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 HCRTO43612 131 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 GAS8O95995 478 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 THP07101 528 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 FAM163BP0C2L3 166 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 GPD1P21695 349 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 HSD17B3P37058 310 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 PDE4CQ08493 712 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 ZDHHC24Q6UX98 284 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 ANKRD52Q8NB46 1076 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 GSTCDQ8NEC7 633 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 CCDC114Q96M63 670 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 TSPYL2Q9H2G4 693 aaPredicted RBP26.27■■□□□ 1.8
CTSA-203ENST00000372459 ZWILCHQ9H900 591 aa26.27■■□□□ 1.8
CTSA-203ENST00000372459 GOLGA8KD6RF30 607 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 KRT10P13645 584 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 CD52P31358 61 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 RAB27AP51159 221 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 BCAT1P54687 386 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 BST2Q10589 180 aaKnown RBP26.26■■□□□ 1.79
CTSA-203ENST00000372459 MRPL10Q7Z7H8 261 aaKnown RBP26.26■■□□□ 1.79
CTSA-203ENST00000372459 ZDHHC17Q8IUH5 632 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 FBXO25Q8TCJ0 367 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 PXYLP1Q8TE99 480 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 CNPY3Q9BT09 278 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 CWC15Q9P013 229 aaKnown RBP26.26■■□□□ 1.79
CTSA-203ENST00000372459 hCG_1818297A0A087WSY0 165 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 C2CD4BA6NLJ0 364 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 GHRP10912 638 aa26.26■■□□□ 1.79
CTSA-203ENST00000372459 PCK1P35558 622 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms