RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 GJA4P35212 333 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 ZNF268Q14587 947 aaPredicted RBP14.09□□□□□ -0.15
RPF1-201ENST00000370654 PPP2R5DQ14738 602 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 MTF1Q14872 753 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 DUOXA2Q1HG44 320 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 LAIR1Q6GTX8 287 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 C1orf228Q6PIY5 440 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
RPF1-201ENST00000370654 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
RPF1-201ENST00000370654 NCOR2Q9Y618 2525 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 PTPRDP23468 1912 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPF1-201ENST00000370654 POLR2DO15514 142 aaKnown RBP14.08□□□□□ -0.16
RPF1-201ENST00000370654 GDF9O60383 454 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 RNF40O75150 1001 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 YEATS4O95619 227 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 TNNC2P02585 160 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 RETP07949 1114 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 PCSK1P29120 753 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 CASP4P49662 377 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 FAM160A1Q05DH4 1040 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 CYP24A1Q07973 514 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 USP4Q13107 963 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 CUL4BQ13620 913 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 CCDC6Q16204 474 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
RPF1-201ENST00000370654 WDR5BQ86VZ2 330 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 SPATA18Q8TC71 538 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 SECISBP2LQ93073 1101 aaKnown RBP14.08□□□□□ -0.16
RPF1-201ENST00000370654 PCED1BQ96HM7 432 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPF1-201ENST00000370654 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 KIF9Q9HAQ2 790 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 SLC39A2Q9NP94 309 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 MAGEC2Q9UBF1 373 aaPredicted RBP14.08□□□□□ -0.16
RPF1-201ENST00000370654 CDH9Q9ULB4 789 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 PCDHA7Q9UN72 937 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 SDK1Q7Z5N4 2213 aa14.08□□□□□ -0.16
RPF1-201ENST00000370654 EML5Q05BV3 1969 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 CLDN5O00501 218 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 SCAMP3O14828 347 aaKnown RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 KIAA0391O15091 583 aaKnown RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 HOXA6P31267 233 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 MAGEA11P43364 429 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 AFMP43652 599 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 MYL6P60660 151 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 GRSF1Q12849 480 aaKnown RBP eCLIP14.07□□□□□ -0.16
RPF1-201ENST00000370654 PSMD6Q15008 389 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 GAB4Q2WGN9 574 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 EML3Q32P44 896 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 UNC13DQ70J99 1090 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 SYNPOQ8N3V7 929 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 GPR161Q8N6U8 529 aaKnown RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 SH3RF2Q8TEC5 729 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 OSCP1Q8WVF1 389 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 MMS19Q96T76 1030 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 CGRRF1Q99675 332 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 RNF38Q9H0F5 515 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 XYLT2Q9H1B5 865 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 SEMA4GQ9NTN9 838 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
RPF1-201ENST00000370654 ZMYM5Q9UJ78 669 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 RAB23Q9ULC3 237 aa14.07□□□□□ -0.16
RPF1-201ENST00000370654 SPTBN2O15020 2390 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 TRAV19A0A0A6YYK7 116 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 SOBPA7XYQ1 873 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 KLRC4O43908 158 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 CKMP06732 381 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 TNNI1P19237 187 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 GRIK1P39086 918 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 LMNB2Q03252 620 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 CC2D1AQ6P1N0 951 aaPredicted RBP14.06□□□□□ -0.16
RPF1-201ENST00000370654 STXBP4Q6ZWJ1 553 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.06□□□□□ -0.16
RPF1-201ENST00000370654 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 SNX21Q969T3 373 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 SPATA17Q96L03 361 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 HHIPQ96QV1 700 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 ZNF518BQ9C0D4 1074 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
RPF1-201ENST00000370654 MYO16Q9Y6X6 1858 aa14.05□□□□□ -0.16
RPF1-201ENST00000370654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.05□□□□□ -0.16
RPF1-201ENST00000370654 PRR5-ARHGAP8B1AHC4 643 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms