RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ATP2A3Q93084 1043 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 HPS3Q969F9 1004 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 VRTNQ9H8Y1 702 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 RCOR1Q9UKL0 485 aa17.25■□□□□ 0.35
VMA21-202ENST00000370361 KIF20AO95235 890 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 CKMP06732 381 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 DRD1P21728 446 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
VMA21-202ENST00000370361 SOX9P48436 509 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 GPR15P49685 360 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 CYP2J2P51589 502 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 NOP14P78316 857 aaKnown RBP17.24■□□□□ 0.35
VMA21-202ENST00000370361 SATB1Q01826 763 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 TNK2Q07912 1038 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 NR1H3Q13133 447 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 KCNB1Q14721 858 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 MTF1Q14872 753 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 PON2Q15165 354 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 LMBRD2Q68DH5 695 aaPredicted RBP17.24■□□□□ 0.35
VMA21-202ENST00000370361 TXNDC11Q6PKC3 985 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 DENND5BQ6ZUT9 1274 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 SLC9A9Q8IVB4 645 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 OSCP1Q8WVF1 389 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 C8orf48Q96LL4 319 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 TTLL2Q9BWV7 592 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 ELOVL4Q9GZR5 314 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
VMA21-202ENST00000370361 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 EXOC3O60645 756 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 TADA3O75528 432 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 GRIK1P39086 918 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 USP4Q13107 963 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 GAS6Q14393 721 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 ZNF77Q15935 545 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 SMG9Q9H0W8 520 aaKnown RBP17.23■□□□□ 0.35
VMA21-202ENST00000370361 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 DLL3Q9NYJ7 618 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 TRPM5Q9NZQ8 1165 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 ARHGAP26Q9UNA1 814 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 CCL26Q9Y258 94 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
VMA21-202ENST00000370361 GPR179Q6PRD1 2367 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 PTPRDP23468 1912 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 WDR87Q6ZQQ6 2873 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 CHURC1-FNTBB4DL54 471 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 K7ESF4 209 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 RETP07949 1114 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 P4HA1P13674 534 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 CMA1P23946 247 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 LMO2P25791 158 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 IFNAR2P48551 515 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 CLDN10P78369 228 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 WDR72Q3MJ13 1102 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 SDHAF4Q5VUM1 108 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 DGLUCYQ7Z3D6 616 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 WDR5BQ86VZ2 330 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 CAMKK1Q8N5S9 505 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 EBF3Q9H4W6 596 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 TRPC7Q9HCX4 862 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 SLC39A2Q9NP94 309 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 CRTAC1Q9NQ79 661 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 RBM12Q9NTZ6 932 aaKnown RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
VMA21-202ENST00000370361 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 FRYLO94915 3013 aa17.22■□□□□ 0.35
VMA21-202ENST00000370361 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 DCHS1Q96JQ0 3298 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 CLIC2O15247 247 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 PHACTR2O75167 634 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 HDCP19113 662 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 BDNFP23560 247 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 AFMP43652 599 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.35
VMA21-202ENST00000370361 CUL4BQ13620 913 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 PKP1Q13835 747 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 SIM2Q14190 667 aaPredicted RBP17.21■□□□□ 0.35
VMA21-202ENST00000370361 DDX42Q86XP3 938 aaKnown RBP eCLIP17.21■□□□□ 0.35
VMA21-202ENST00000370361 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 TNIP3Q96KP6 325 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
VMA21-202ENST00000370361 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 PDXKO00764 312 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 SLC9A3R1O14745 358 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms