RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 POLD1P28340 1107 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 HSPA13P48723 471 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 ITGADQ13349 1161 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 AP3B2Q13367 1082 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
RAP1A-202ENST00000369709 UTP6Q9NYH9 597 aaKnown RBP12.9□□□□□ -0.34
RAP1A-202ENST00000369709 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
RAP1A-202ENST00000369709 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
RAP1A-202ENST00000369709 TRMUO75648 421 aaKnown RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 ADRM1Q16186 407 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 DEPTORQ8TB45 409 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 SNX25Q9H3E2 840 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 AP4B1Q9Y6B7 739 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 MAP3K6O95382 1288 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 KCNA4P22459 653 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 STX1BP61266 288 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 HAUS6Q7Z4H7 955 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 CCNYQ8ND76 341 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 PKNOX1P55347 436 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 ITPRIPL1Q6GPH6 555 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 GNPATO15228 680 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 MAP3K13O43283 966 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 DLG4P78352 724 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 HPCAP84074 193 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 RMND5BQ96G75 393 aaPredicted RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
RAP1A-202ENST00000369709 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
RAP1A-202ENST00000369709 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 PEX6Q13608 980 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 KCNK4Q9NYG8 393 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 MAGEB3O15480 346 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 DCXO43602 365 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 MRPS15P82914 257 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 BNC2Q6ZN30 1099 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 CROCCP3Q8IVE0 287 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 DDX56Q9NY93 547 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 HBS1LQ9Y450 684 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 NWD1Q149M9 1564 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 PIK3R2O00459 728 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 P4HA2O15460 535 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 CETPP11597 493 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 GZMAP12544 262 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 ELK3P41970 407 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 MAGEA8P43361 318 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 PTTG2Q9NZH5 202 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 TISP43B9A030 160 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
RAP1A-202ENST00000369709 KIF19Q2TAC6 998 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 HEATR4Q86WZ0 1026 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 ZNF354CQ86Y25 554 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
RAP1A-202ENST00000369709 ASTN1O14525 1302 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 GNGT2O14610 69 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 TM7SF2O76062 418 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 SESN2P58004 480 aaPredicted RBP12.87□□□□□ -0.35
RAP1A-202ENST00000369709 BST1Q10588 318 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 ITGA9Q13797 1035 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
RAP1A-202ENST00000369709 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms