RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZSWIM1Q9BR11 485 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 NUP58Q9BVL2 599 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 ABCB6Q9NP58 842 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 KIAA1257Q9ULG3 409 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 MAFFQ9ULX9 164 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 GREB1Q4ZG55 1949 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 F8VP50 259 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 BEST1O76090 585 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 FAM200BP0CF97 657 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ATF6P18850 670 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ANXA13P27216 316 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 EPHB3P54753 998 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 RPL10AP62906 217 aaKnown RBP14.73□□□□□ -0.05
TPM3-211ENST00000368531 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
TPM3-211ENST00000368531 COL19A1Q14993 1142 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 TAF12Q16514 161 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ARHGAP17Q68EM7 881 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 TMC6Q7Z403 805 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ZNF606Q8WXB4 792 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ZNF512Q96ME7 567 aaPredicted RBP14.73□□□□□ -0.05
TPM3-211ENST00000368531 SMOQ99835 787 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 PRKD2Q9BZL6 878 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 TMEM30AQ9NV96 361 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 HCFC1R1Q9NWW0 138 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 ZDHHC7Q9NXF8 308 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 HESX1Q9UBX0 185 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 CD207Q9UJ71 328 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 TSPAN16Q9UKR8 245 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 DAAM1Q9Y4D1 1078 aa14.73□□□□□ -0.05
TPM3-211ENST00000368531 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.72□□□□□ -0.05
TPM3-211ENST00000368531 FAM170AA1A519 330 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 LRRC53A6NM62 1247 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 M0QYV0 167 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 O00370 1275 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 MICAL2O94851 1124 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 HNRNPA1P09651 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPM3-211ENST00000368531 HOXB8P17481 243 aaPredicted RBP14.72□□□□□ -0.05
TPM3-211ENST00000368531 MAGEA11P43364 429 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 NTHL1P78549 312 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 PLD1Q13393 1074 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 MTMR3Q13615 1198 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 VEPH1Q14D04 833 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 CNGA2Q16280 664 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 TAF3Q5VWG9 929 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 SPECC1LQ69YQ0 1117 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 VSTM1Q6UX27 236 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 TTC30AQ86WT1 665 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 ELMOD1Q8N336 334 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 BAP1Q92560 729 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 ZNF707Q96C28 371 aaPredicted RBP14.72□□□□□ -0.05
TPM3-211ENST00000368531 MSLNLQ96KJ4 702 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 CORO1BQ9BR76 489 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 TTYH3Q9C0H2 523 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 S1PR5Q9H228 398 aa14.72□□□□□ -0.05
TPM3-211ENST00000368531 DMAP1Q9NPF5 467 aaPredicted RBP14.72□□□□□ -0.05
TPM3-211ENST00000368531 MAGED2Q9UNF1 606 aaPredicted RBP14.72□□□□□ -0.05
TPM3-211ENST00000368531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.72□□□□□ -0.051e-10■■■□□ 18
TPM3-211ENST00000368531 ITIH6Q6UXX5 1313 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 TRANK1O15050 2925 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 GOLGA6L3A6NEY3 463 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 SLC38A8A6NNN8 435 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 TRIM66O15016 1216 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 MED7O43513 233 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 XYLBO75191 536 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 GYPCP04921 128 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 CFHP08603 1231 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 CYP11B1P15538 503 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 CASP14P31944 242 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 BPIFB4P59827 614 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 TFF2Q03403 129 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 PDE4CQ08493 712 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 GOLGA8FQ08AF8 430 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 GOLGA8DPQ0D2H9 430 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 SFMBT2Q5VUG0 894 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 CES5AQ6NT32 575 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 LCLAT1Q6UWP7 414 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 CLEC20AQ6ZU45 233 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 RTL10Q7L3V2 364 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 GRASPQ7Z6J2 395 aaPredicted RBP14.71□□□□□ -0.05
TPM3-211ENST00000368531 DNAJB7Q7Z6W7 309 aaPredicted RBP14.71□□□□□ -0.05
TPM3-211ENST00000368531 NOP9Q86U38 636 aaKnown RBP14.71□□□□□ -0.05
TPM3-211ENST00000368531 PASD1Q8IV76 773 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 ANKRD52Q8NB46 1076 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 ZMIZ2Q8NF64 920 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 DUSP16Q9BY84 665 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
TPM3-211ENST00000368531 DNMT3BQ9UBC3 853 aaKnown RBP14.71□□□□□ -0.05
TPM3-211ENST00000368531 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
TPM3-211ENST00000368531 ZNF638Q14966 1978 aaKnown RBP14.71□□□□□ -0.06
TPM3-211ENST00000368531 CDH23Q9H251 3354 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 TULP2O00295 520 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 ADCY5O95622 1261 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 MYL4P12829 197 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms