RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 GRM1Q13255 1194 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 STX3Q13277 289 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 KIRREL3Q8IZU9 778 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 RXFP1Q9HBX9 757 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 XPO7Q9UIA9 1087 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 APOBEC2Q9Y235 224 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 STXBP5LQ9Y2K9 1186 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 C4AP0C0L4 1744 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 C4BP0C0L5 1744 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 CNTFP26441 200 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 EIF2B2P49770 351 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 PTP4A2Q12974 167 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 PRKG1Q13976 671 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 KPNB1Q14974 876 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 DNAL1Q4LDG9 190 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 BOLA3Q53S33 107 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZBTB41Q5SVQ8 909 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TTC39BQ5VTQ0 682 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 RHPN2Q8IUC4 686 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TTC17Q96AE7 1141 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTBPQ96DY7 904 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 STMN3Q9NZ72 180 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYPNQ86TC9 1320 aa5.6□□□□□ -1.51
CDC42BPA-204ENST00000366767 TFRCP02786 760 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PGM1P36871 562 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 IGBP1P78318 339 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PDK2Q15119 407 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CNGA3Q16281 694 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SCARA5Q6ZMJ2 495 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SPOCD1Q6ZMY3 1216 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TATDN2Q93075 761 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACAP3Q96P50 834 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 FBXO28Q9NVF7 368 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 GGT7Q9UJ14 662 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TLK1Q9UKI8 766 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SHOC2Q9UQ13 582 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 RHOBTB1O94844 696 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PYGMP11217 842 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 RRM1P23921 792 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF268Q14587 947 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 METTL23Q86XA0 190 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SIX5Q8N196 739 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ATG4CQ96DT6 458 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MFSD14AQ96MC6 490 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF560Q96MR9 790 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NR1H4Q96RI1 486 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SEMA4AQ9H3S1 761 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC4BQ9NT99 713 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRP5O75197 1615 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ATRNL1Q5VV63 1379 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 E7ENQ6 273 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 H3BRJ5 948 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CAPN1P07384 714 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 GPD1P21695 349 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 EPHB1P54762 984 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 DEFA1P59665 94 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 DEFA3P59666 94 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 LACTB2Q53H82 288 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CEP78Q5JTW2 689 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 HEATR6Q6AI08 1181 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 GPAT2Q6NUI2 795 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTHFD1LQ6UB35 978 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NT5DC4Q86YG4 428 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PHF13Q86YI8 300 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TAB3Q8N5C8 712 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 GIPC2Q8TF65 315 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CNBD2Q96M20 576 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PPP1R2P1Q96PQ5 205 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MMP19Q99542 508 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM39BQ9GZU3 492 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NGRNQ9NPE2 291 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NDUFA13Q9P0J0 144 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NQO1P15559 274 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM102AQ5T9C2 384 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MPZL3Q6UWV2 235 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NOP9Q86U38 636 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 OR6B3Q8NGW1 331 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC20A1Q8WUM9 679 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM143Q96AN5 459 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMPRSS15P98073 1019 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF484Q5JVG2 852 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ATF7IP2Q5U623 682 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 RAPH1Q70E73 1250 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 RNF149Q8NC42 400 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTMR14Q8NCE2 650 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 PROCA1Q8NCQ7 364 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 C9orf72Q96LT7 481 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MCEEQ96PE7 176 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SALL4Q9UJQ4 1053 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM59LQ9UK28 342 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 STAP1Q9ULZ2 295 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CLEC11AQ9Y240 323 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYH13Q9UKX3 1938 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CICQ96RK0 1608 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 SNRPAP09012 282 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms