RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SCN4BQ8IWT1 228 aa22.65■■□□□ 1.22
CD47-202ENST00000361309 ARL14EPQ8N8R7 260 aaPredicted RBP22.65■■□□□ 1.22
CD47-202ENST00000361309 TCEAL3Q969E4 200 aa22.65■■□□□ 1.22
CD47-202ENST00000361309 ITGA11Q9UKX5 1188 aa22.65■■□□□ 1.22
CD47-202ENST00000361309 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.65■■□□□ 1.22
CD47-202ENST00000361309 C2orf78A6NCI8 922 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 GARTP22102 1010 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 LHX1P48742 406 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 CASP5P51878 434 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 ELF2Q15723 593 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 CFAP221Q4G0U5 840 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 RRAGBQ5VZM2 374 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 RNF43Q68DV7 783 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 ADGRF2Q8IZF7 708 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 TOP6BLQ8N6T0 577 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 NOC3LQ8WTT2 800 aaKnown RBP22.64■■□□□ 1.21
CD47-202ENST00000361309 ACDQ96AP0 544 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 LSM14BQ9BX40 385 aaKnown RBP22.64■■□□□ 1.21
CD47-202ENST00000361309 GCNT4Q9P109 453 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 SIX4Q9UIU6 781 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 CLIC4Q9Y696 253 aa22.64■■□□□ 1.21
CD47-202ENST00000361309 GABRDO14764 452 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 RHOBTB1O94844 696 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 KCNK5O95279 499 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 PCSK1P29120 753 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 RBP5P82980 135 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 CREB5Q02930 508 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 SOWAHAQ2M3V2 549 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 SV2BQ7L1I2 683 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 SYCP3Q8IZU3 236 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 FSIP1Q8NA03 581 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 SPATA18Q8TC71 538 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 SH3RF2Q8TEC5 729 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 FUBP3Q96I24 572 aaKnown RBP eCLIP22.63■■□□□ 1.21
CD47-202ENST00000361309 CBWD1Q9BRT8 395 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 MTMR12Q9C0I1 747 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 LINC00597Q9H2U6 94 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 PCIF1Q9H4Z3 704 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 PDE11AQ9HCR9 933 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 EBF1Q9UH73 591 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 PCDHB13Q9Y5F0 798 aa22.63■■□□□ 1.21
CD47-202ENST00000361309 IDEP14735 1019 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 DGKEP52429 567 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 SHC2P98077 582 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 NR1H3Q13133 447 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 FAM171BQ6P995 826 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 CLIC6Q96NY7 704 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 FGFBP2Q9BYJ0 223 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 OLFML3Q9NRN5 406 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 FBXO2Q9UK22 296 aaPredicted RBP22.62■■□□□ 1.21
CD47-202ENST00000361309 INVSQ9Y283 1065 aa22.62■■□□□ 1.21
CD47-202ENST00000361309 MYO18AQ92614 2054 aaKnown RBP22.61■■□□□ 1.21
CD47-202ENST00000361309 ATP2C2O75185 946 aa22.61■■□□□ 1.21
CD47-202ENST00000361309 TMEM191BP0C7N4 346 aa22.61■■□□□ 1.21
CD47-202ENST00000361309 HDCP19113 662 aa22.61■■□□□ 1.21
CD47-202ENST00000361309 KCNB1Q14721 858 aa22.61■■□□□ 1.21
CD47-202ENST00000361309 LMBRD2Q68DH5 695 aaPredicted RBP22.61■■□□□ 1.21
CD47-202ENST00000361309 EDEM2Q9BV94 578 aa22.61■■□□□ 1.21
CD47-202ENST00000361309 SRPRBQ9Y5M8 271 aaKnown RBP22.61■■□□□ 1.21
CD47-202ENST00000361309 BCLAF3A2AJT9 711 aaKnown RBP22.6■■□□□ 1.21
CD47-202ENST00000361309 VPS37CA5D8V6 355 aaPredicted RBP22.6■■□□□ 1.21
CD47-202ENST00000361309 CAVIN2O95810 425 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 TCF3P15923 654 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 GBP1P32455 592 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 MAGEA11P43364 429 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 PSAPL1Q6NUJ1 521 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 C4orf50Q6ZRC1 276 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 TSTD1Q8NFU3 115 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 SYT15Q9BQS2 421 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 MAGEC2Q9UBF1 373 aaPredicted RBP22.6■■□□□ 1.21
CD47-202ENST00000361309 ARHGAP26Q9UNA1 814 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 PI4KAP42356 2102 aa22.6■■□□□ 1.21
CD47-202ENST00000361309 NFATC1O95644 943 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 LMO2P25791 158 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 TXLNAP40222 546 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 SEC13P55735 322 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 PSMC1P62191 440 aaKnown RBP22.59■■□□□ 1.21
CD47-202ENST00000361309 ZXDBP98169 803 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 MYO1EQ12965 1108 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 ALCAMQ13740 583 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 GPD1LQ8N335 351 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 USP33Q8TEY7 942 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 KBTBD7Q8WVZ9 684 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 MYLPFQ96A32 169 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 ANKRD36BP1Q96IX9 119 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 TPSD1Q9BZJ3 242 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 INTS13Q9NVM9 706 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 CDH9Q9ULB4 789 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 R3HCC1Q9Y3T6 440 aaKnown RBP22.59■■□□□ 1.21
CD47-202ENST00000361309 GON4LQ3T8J9 2241 aa22.59■■□□□ 1.21
CD47-202ENST00000361309 PTPRJQ12913 1337 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 FRMD3A2A2Y4 597 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 ANTXRLA6NF34 631 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 C4orf47A7E2U8 309 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 K7EQS6 105 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 PRPF6O94906 941 aaKnown RBP22.58■■□□□ 1.21
CD47-202ENST00000361309 BDNFP23560 247 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 OPRD1P41143 372 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 USP39Q53GS9 565 aaKnown RBP22.58■■□□□ 1.21
CD47-202ENST00000361309 C2orf27AQ580R0 203 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms