RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 JAKMIP2Q96AA8 810 aa20.34■□□□□ 0.85
HLA-DRB1-201ENST00000360004 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
HLA-DRB1-201ENST00000360004 DMAP1Q9NPF5 467 aaPredicted RBP20.34■□□□□ 0.85
HLA-DRB1-201ENST00000360004 HESX1Q9UBX0 185 aa20.34■□□□□ 0.85
HLA-DRB1-201ENST00000360004 REV3LO60673 3130 aa20.34■□□□□ 0.85
HLA-DRB1-201ENST00000360004 F8VP50 259 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 FGF19O95750 216 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 RFX1P22670 979 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 IFRD2Q12894 506 aaPredicted RBP20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 SYCP1Q15431 976 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 OTOP3Q7RTS5 596 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 DNAJB7Q7Z6W7 309 aaPredicted RBP20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 HS6ST3Q8IZP7 471 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 TDRD5Q8NAT2 981 aaKnown RBP20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 PSMG2Q969U7 264 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 KREMEN1Q96MU8 473 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 FAM207AQ9NSI2 230 aaPredicted RBP20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 EHD2Q9NZN4 543 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 PRKAG3Q9UGI9 489 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 KIAA1257Q9ULG3 409 aa20.33■□□□□ 0.85
HLA-DRB1-201ENST00000360004 SLC38A8A6NNN8 435 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PAEPP09466 180 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 VDRP11473 427 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 BMP1P13497 986 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ZNF445P59923 1031 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 KCNMA1Q12791 1236 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ADHFE1Q8IWW8 467 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 FUKQ8N0W3 1084 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ADAMTS19Q8TE59 1207 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 C8orf48Q96LL4 319 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 HNRNPABQ99729 332 aaKnown RBP20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SLITRK6Q9H5Y7 841 aa20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 UXTQ9UBK9 157 aaPredicted RBP20.32■□□□□ 0.84
HLA-DRB1-201ENST00000360004 EYSQ5T1H1 3165 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 LRRC10BA6NIK2 292 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 TPM3P06753 285 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ACO1P21399 889 aaKnown RBP20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 MAP3K7CLP57077 242 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 FANCCQ00597 558 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 GOLGA7BQ2TAP0 167 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ARHGAP15Q53QZ3 475 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PPP1R26Q5T8A7 1209 aaPredicted RBP20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 KLHDC7AQ5VTJ3 777 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 DENND5BQ6ZUT9 1274 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 UBR7Q8N806 425 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 STKLD1Q8NE28 680 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ING5Q8WYH8 240 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ATXN3LQ9H3M9 355 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SIX2Q9NPC8 291 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 FHOD1Q9Y613 1164 aa20.31■□□□□ 0.84
HLA-DRB1-201ENST00000360004 COL6A3P12111 3177 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 UCHL3P15374 230 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 GABRR2P28476 465 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CDC25CP30307 473 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PLCB2Q00722 1185 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SPATA17Q96L03 361 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CEP295NLQ96MC4 621 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PLCB1Q9NQ66 1216 aa20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-DRB1-201ENST00000360004 THAP12O43422 761 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 MED7O43513 233 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PAPLNO95428 1278 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 NPR3P17342 541 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 BRD2P25440 801 aaKnown RBP20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 KLK7P49862 253 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 UBASH3AP57075 661 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 POLR2FP61218 127 aaKnown RBP20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 MTMR3Q13615 1198 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 STILQ15468 1287 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ARHGAP17Q68EM7 881 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PLCD3Q8N3E9 789 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ITFG1Q8TB96 612 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 KCNK16Q96T55 309 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 UHRF1Q96T88 793 aaPredicted RBP20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 RTN4Q9NQC3 1192 aaKnown RBP20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 TSPAN16Q9UKR8 245 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 USTQ9Y2C2 406 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 DAAM1Q9Y4D1 1078 aa20.29■□□□□ 0.84
HLA-DRB1-201ENST00000360004 A0A1W2PRU2 124 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 M0QYV0 167 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 GJA1P17302 382 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 GNA15P30679 374 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CACNA2D1P54289 1103 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 BCAT1P54687 386 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PTK2Q05397 1052 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ZP2Q05996 745 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 DRAP1Q14919 205 aaPredicted RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PAQR9Q6ZVX9 377 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 APTXQ7Z2E3 356 aaKnown RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 NUP93Q8N1F7 819 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SHC3Q92529 594 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 MRPS31Q92665 395 aaKnown RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ERGIC2Q96RQ1 377 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SMOQ99835 787 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 DUSP16Q9BY84 665 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms