RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RSPH3Q86UC2 560 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 SESTD1Q86VW0 696 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 NME8Q8N427 588 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 SLC20A1Q8WUM9 679 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 KCNN1Q92952 543 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ZNF333Q96JL9 665 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 APOL6Q9BWW8 343 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 FAM170AA1A519 330 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 FSCN2O14926 492 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 OGTO15294 1046 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 FAM189A1O60320 539 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 PQBP1O60828 265 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 NPTXRO95502 500 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ECEL1O95672 775 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CYP1A2P05177 515 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CXCL8P10145 99 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 IRX1P78414 480 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 FAM187BQ17R55 369 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 SCARA3Q6AZY7 606 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 PHF24Q9UPV7 400 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 TRPV2Q9Y5S1 764 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ACTL7BQ9Y614 415 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CITO14578 2027 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ANK1P16157 1881 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 ARVCFO00192 962 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 PMM2O15305 246 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 SMNDC1O75940 238 aaKnown RBP eCLIP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CREB1P16220 341 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CHRNB2P17787 502 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 ITIH2P19823 946 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 IVDP26440 423 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CDC42EP1Q00587 391 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 MPP2Q14168 576 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 LRRC14Q15048 493 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 NUGGCQ68CJ6 796 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 SYDE1Q6ZW31 735 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 MAGEB18Q96M61 343 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 DIAPH2O60879 1101 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 NEBLO76041 1014 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 SGPL1O95470 568 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 TTC4O95801 387 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 STAG3L1P0CL83 205 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 MGAT5Q09328 741 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 PARP6Q2NL67 630 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 KIRREL3Q8IZU9 778 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 DYDC1Q8WWB3 177 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 PRCCQ92733 491 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 PCDHB18PQ96TA0 734 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 ADPGKQ9BRR6 497 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CXCL16Q9H2A7 254 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CPSF3Q9UKF6 684 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 CORO1CQ9ULV4 474 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-202ENST00000357348 UNC5CO95185 931 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 MXI1P50539 228 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 CAV1Q03135 178 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 CETN1Q12798 172 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.276e-9■■■■■ 59.3
RTFDC1-202ENST00000357348 BLMHQ13867 455 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 CMPK2Q5EBM0 449 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 RMDN2Q96LZ7 410 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 ST3GAL5Q9UNP4 418 aa13.34□□□□□ -0.27
RTFDC1-202ENST00000357348 A8MUI8 341 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 CKBP12277 381 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 AKAP5P24588 427 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 CD52P31358 61 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 KCNJ1P48048 391 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 RWDD2BP57060 319 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 PTK7Q13308 1070 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 PTK6Q13882 451 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 MESDQ14696 234 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 TWF2Q6IBS0 349 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 NOTUMQ6P988 496 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms