RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 SLC7A3Q8WY07 619 aa13.99□□□□□ -0.17
NCDN-201ENST00000356090 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
NCDN-201ENST00000356090 PAPOLBQ9NRJ5 636 aaKnown RBP13.99□□□□□ -0.17
NCDN-201ENST00000356090 ZNF277Q9NRM2 450 aaPredicted RBP13.99□□□□□ -0.17
NCDN-201ENST00000356090 RABGEF1Q9UJ41 708 aa13.99□□□□□ -0.17
NCDN-201ENST00000356090 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
NCDN-201ENST00000356090 WASF2Q9Y6W5 498 aa13.99□□□□□ -0.17
NCDN-201ENST00000356090 CLUHO75153 1309 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 KBTBD13C9JR72 458 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TXNDC9O14530 226 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TMEM191BP0C7N4 346 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 RAP1GAPP47736 663 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 EMC2Q15006 297 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.98□□□□□ -0.17
NCDN-201ENST00000356090 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 CPT1BQ92523 772 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 ATG4CQ96DT6 458 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TRIM4Q9C037 500 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 JPH1Q9HDC5 661 aaPredicted RBP13.98□□□□□ -0.17
NCDN-201ENST00000356090 XPNPEP1Q9NQW7 623 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 NUMBLQ9Y6R0 609 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 ZNF541Q9H0D2 1346 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TYROBPO43914 113 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TOM1L1O75674 476 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 WFS1O76024 890 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 GNAZP19086 355 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 GARTP22102 1010 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 TNFSF9P41273 254 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 EPHB1P54762 984 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 RASA2Q15283 850 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 RBBP5Q15291 538 aaKnown RBP13.98□□□□□ -0.17
NCDN-201ENST00000356090 TAF5Q15542 800 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 CASC4Q6P4E1 433 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 ISLR2Q6UXK2 745 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 ZCCHC23Q6ZST2 131 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 PPP1R16BQ96T49 567 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 PXMP2Q9NR77 195 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 RAB6BQ9NRW1 208 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 ZNF536O15090 1300 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 KIF13BQ9NQT8 1826 aa13.98□□□□□ -0.17
NCDN-201ENST00000356090 E2F8A0AVK6 867 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 TMEM191CA6NGB0 347 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 YDJCA8MPS7 323 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 GSC2O15499 205 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 RNF8O76064 485 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 TMEM63AO94886 807 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 ZNF200P98182 395 aaPredicted RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 SNRNP48Q6IEG0 339 aaKnown RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 TIPINQ9BVW5 301 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 NMUR2Q9GZQ4 415 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 C2CD2Q9Y426 696 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 BTAF1O14981 1849 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 MEI4A8MW99 385 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 ZC3H11AO75152 810 aaKnown RBP eCLIP13.97□□□□□ -0.17
NCDN-201ENST00000356090 C4BPAP04003 597 aaKnown RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 CCND2P30279 289 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 SERPINB4P48594 390 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 JOSD2Q8TAC2 188 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 SH3GL3Q99963 347 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 ST6GALNAC4Q9H4F1 302 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
NCDN-201ENST00000356090 CISHQ9NSE2 258 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 TBX10O75333 385 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 APRTP07741 180 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 MMP8P22894 467 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 ACTR2P61160 394 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 PSMD6Q15008 389 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 TAS2R1Q9NYW7 299 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 FZD1Q9UP38 647 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 STRCQ7RTU9 1775 aa13.97□□□□□ -0.17
NCDN-201ENST00000356090 PSMG1O95456 288 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 CDH6P55285 790 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 PRKG1Q13976 671 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 PCGF5Q86SE9 256 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 PHF13Q86YI8 300 aaPredicted RBP13.96□□□□□ -0.17
NCDN-201ENST00000356090 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 SERAC1Q96JX3 654 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 LRRC42Q9Y546 428 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 CYB561D2O14569 222 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 USP1O94782 785 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.17
NCDN-201ENST00000356090 AMPD1P23109 780 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 CDKN2BP42772 138 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 PAPOLAP51003 745 aaKnown RBP13.96□□□□□ -0.17
NCDN-201ENST00000356090 CDH8P55286 799 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 ZNF252P-AS1Q0IIN9 211 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 PIGHQ14442 188 aaPredicted RBP13.96□□□□□ -0.17
NCDN-201ENST00000356090 CHI3L2Q15782 390 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms