RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SGF29Q96ES7 293 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 GTF2A1LQ9UNN4 478 aa15.44■□□□□ 0.06
LMX1B-201ENST00000355497 TRIM24O15164 1050 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 NCAM1P13591 858 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 DARSP14868 501 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 EIF2B5Q13144 721 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 BFSP2Q13515 415 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 COG2Q14746 738 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 CYP4A22Q5TCH4 519 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 KCNB2Q92953 911 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SIKE1Q9BRV8 207 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 FRMD8P1Q9BZ68 369 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 NIF3L1Q9GZT8 377 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 EPS8L2Q9H6S3 715 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 RPS6KB2Q9UBS0 482 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SPACA6W5XKT8 324 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 MYMKA6NI61 221 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SKAP2O75563 359 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 PHKG1Q16816 387 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SH3BP5LQ7L8J4 393 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 LRRC34Q8IZ02 419 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 MRPL48Q96GC5 212 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 HIC2Q96JB3 615 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SHCBP1LQ9BZQ2 653 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 STX7O15400 261 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 TGM2P21980 687 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 OVGP1Q12889 678 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 GALNTL6Q49A17 601 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 TRIM48Q8IWZ4 208 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SEPT1Q8WYJ6 367 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 MAGEB18Q96M61 343 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 TSEN34Q9BSV6 310 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 RUVBL2Q9Y230 463 aaKnown RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 KANSL1LA0AUZ9 987 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 C2orf81A6NN90 581 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 RPS6KA5O75582 802 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 DENND1BQ6P3S1 775 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 C3orf20Q8ND61 904 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 EFCAB1Q9HAE3 211 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.43■□□□□ 0.06
LMX1B-201ENST00000355497 FAM153AQ9UHL3 310 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
LMX1B-201ENST00000355497 PSTPIP1O43586 416 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 NQO1P15559 274 aaKnown RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 HNRNPH1P31943 449 aaKnown RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 HSD17B3P37058 310 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KDM7AQ6ZMT4 941 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 BNC2Q6ZN30 1099 aaPredicted RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 ATP6V0D2Q8N8Y2 350 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 RAET1EQ8TD07 263 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 PPP1R14AQ96A00 147 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KLHL25Q9H0H3 589 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 PDS5AQ29RF7 1337 aaKnown RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KBTBD13C9JR72 458 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 FNTAP49354 379 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 RAD9BQ6WBX8 426 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KCTD10Q9H3F6 313 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 HEY2Q9UBP5 337 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 NAGPAQ9UK23 515 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 SUPT7LO94864 414 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KCNJ1P48048 391 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 PRKCEQ02156 737 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 MTM1Q13496 603 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 ZC2HC1CQ53FD0 456 aaPredicted RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 DENND5BQ6ZUT9 1274 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 UTP6Q9NYH9 597 aaKnown RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 SNX13Q9Y5W8 968 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 LINC00854A0A1B0GVQ3 168 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 TRIM13O60858 407 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 ZNF543Q08ER8 600 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 MMRN1Q13201 1228 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 PKN2Q16513 984 aaKnown RBP15.42■□□□□ 0.06
LMX1B-201ENST00000355497 PGS1Q32NB8 556 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KLHDC7AQ5VTJ3 777 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 MRNIPQ6NTE8 343 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 CCDC149Q6ZUS6 474 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 TC2NQ8N9U0 490 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 COQ7Q99807 217 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 MAN1C1Q9NR34 630 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 RAD18Q9NS91 495 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 CDC42BPGQ6DT37 1551 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KLK7P49862 253 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 TSGA10IPQ3SY00 556 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 ANKS6Q68DC2 871 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 KRT77Q7Z794 578 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 SCUBE1Q8IWY4 988 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 C19orf18Q8NEA5 215 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 CENPTQ96BT3 561 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 SH2D3AQ9BRG2 576 aa15.42■□□□□ 0.06
LMX1B-201ENST00000355497 BAATQ14032 418 aaPredicted RBP15.41■□□□□ 0.06
LMX1B-201ENST00000355497 CYB5D1Q6P9G0 228 aa15.41■□□□□ 0.06
LMX1B-201ENST00000355497 OR8H2Q8N162 312 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms