RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 XXYLT1Q8NBI6 393 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 LMO3Q8TAP4 145 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 RSAD2Q8WXG1 361 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 CFAP36Q96G28 342 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 LRGUKQ96M69 825 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ANLNQ9NQW6 1124 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 SAE1Q9UBE0 346 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF180Q9UJW8 692 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 F5H6K3 240 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 XPO1O14980 1071 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ATP9BO43861 1147 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 STAMBPO95630 424 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 KLRC2P26717 231 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 GPX6P59796 221 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 C16orf72Q14CZ0 275 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 PRKD1Q15139 912 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 DUS1LQ6P1R4 473 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 PAOXQ6QHF9 649 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 RSPH3Q86UC2 560 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 NLRX1Q86UT6 975 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 FAM84AQ96KN4 292 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 TRIM56Q9BRZ2 755 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 USP29Q9HBJ7 922 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 GPAMQ9HCL2 828 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ANKRD36CQ5JPF3 1778 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 TAF1P21675 1872 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 TRIM49D1C9J1S8 452 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 BUD23O43709 281 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 LIASO43766 372 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 GAS7O60861 476 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ZMPSTE24O75844 475 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 VIL1P09327 827 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SRGAP2CP0DJJ0 459 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SRGAP2BP0DMP2 458 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 MSLNQ13421 630 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 PEX6Q13608 980 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 CCDC92Q53HC0 331 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 EFHC2Q5JST6 749 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ZFP28Q8NHY6 868 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SERAC1Q96JX3 654 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 FAM20AQ96MK3 541 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 GLT8D2Q9H1C3 349 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 LIN28AQ9H9Z2 209 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGEF4Q9NR80 690 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 HSPBP1Q9NZL4 362 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 THEGQ9P2T0 379 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 VILLO15195 856 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 TRMUO75648 421 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 PROSCO94903 275 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 CLEC16AQ2KHT3 1053 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 MFSD7Q6UXD7 560 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 C1orf186Q6ZWK4 172 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 MCOLN2Q8IZK6 566 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 DEFB107AQ8IZN7 70 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 APOPT1Q96IL0 206 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SRPK1Q96SB4 655 aaKnown RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 SENP7Q9BQF6 1050 aa7.97□□□□□ -1.13
BRCA1-201ENST00000352993 TOPORSQ9NS56 1045 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-201ENST00000352993 ARFGEF1Q9Y6D6 1849 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 TTLL13PA6NNM8 815 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 H3BSA7 217 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 IPO5O00410 1097 aaKnown RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 CYB561D2O14569 222 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 TGDSO95455 350 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 CFBP00751 764 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 SLURP2P0DP57 97 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 EIF4BP23588 611 aaKnown RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 ALDH1A3P47895 512 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 MYLK3Q32MK0 819 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 FNBP1LQ5T0N5 605 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 INTS5Q6P9B9 1019 aaKnown RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 FBXL19Q6PCT2 694 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 AAGABQ6PD74 315 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 DCUN1D2Q6PH85 259 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 HPS6Q86YV9 775 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 RELL1Q8IUW5 271 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 ARAP2Q8WZ64 1704 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 SEMA4DQ92854 862 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 TEKT1Q969V4 418 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 EBF4Q9BQW3 602 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 PPCSQ9HAB8 311 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 APOBEC2Q9Y235 224 aaKnown RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 ATF5Q9Y2D1 282 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 HEMK1Q9Y5R4 338 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-201ENST00000352993 MAD1L1Q9Y6D9 718 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 STK24Q9Y6E0 443 aa7.96□□□□□ -1.13
BRCA1-201ENST00000352993 ATAD5Q96QE3 1844 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 CLUHO75153 1309 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 DENND3A2RUS2 1198 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TRIM43BA6NCK2 446 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 FAM155BO75949 473 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 FDFT1P37268 417 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 COPAP53621 1224 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 MSS51Q4VC12 460 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms