RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LATS2Q9NRM7 1088 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 ABI2Q9NYB9 513 aaPredicted RBP16.65■□□□□ 0.26
PTPN11-201ENST00000351677 ACO1P21399 889 aaKnown RBP16.65■□□□□ 0.26
PTPN11-201ENST00000351677 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
PTPN11-201ENST00000351677 GALNT4Q8N4A0 578 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 NSMCE4AQ9NXX6 385 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 CD274Q9NZQ7 290 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 ADCY3O60266 1144 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 MED21Q13503 144 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 TRIP10Q15642 601 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 GRAMD4Q6IC98 578 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 NAPEPLDQ6IQ20 393 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 CATSPER1Q8NEC5 780 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 RPS6KL1Q9Y6S9 549 aa16.64■□□□□ 0.26
PTPN11-201ENST00000351677 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 HNRNPH1P31943 449 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 LRRC6Q86X45 466 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 GTPBP10A4D1E9 387 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 TGM2P21980 687 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 NUMBP49757 651 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 KCNMA1Q12791 1236 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 MFN1Q8IWA4 741 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 PRG3Q9Y2Y8 225 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 ARHGAP10A1A4S6 786 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 AP1G2O75843 785 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 ABCE1P61221 599 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 C10orf120Q5SQS8 335 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 CHSY1Q86X52 802 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 DCP1BQ8IZD4 617 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 GTF3C2Q8WUA4 911 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 EME1Q96AY2 570 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 HEY2Q9UBP5 337 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 CDY2AQ9Y6F7 541 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 CDY1Q9Y6F8 540 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 CALML6Q8TD86 181 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 NAF1Q96HR8 494 aaKnown RBP16.64■□□□□ 0.25
PTPN11-201ENST00000351677 PCDHGB4Q9UN71 923 aa16.64■□□□□ 0.25
PTPN11-201ENST00000351677 CYBBP04839 570 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 VIL1P09327 827 aaKnown RBP16.63■□□□□ 0.25
PTPN11-201ENST00000351677 AKT1P31749 480 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 CPT1AP50416 773 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 COG4Q9H9E3 785 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 CD248Q9HCU0 757 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF212Q9UDV6 495 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 HAO1Q9UJM8 370 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
PTPN11-201ENST00000351677 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
PTPN11-201ENST00000351677 FDFT1P37268 417 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 RARRES1P49788 294 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 DNAJC9Q8WXX5 260 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 CAVIN3Q969G5 261 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ADNPQ9H2P0 1102 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 SEMA4AQ9H3S1 761 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 MROH1Q8NDA8 1641 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 EML1O00423 815 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF197O14709 1029 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 CYP2C8P10632 490 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 PKP3Q9Y446 797 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 KLC1Q07866 573 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 MAGEB18Q96M61 343 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 hCG_2014768A0A024R1R8 64 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 MTSS1O43312 755 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 HIST1H2AGP0C0S8 130 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-201ENST00000351677 CXCL8P10145 99 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 HIST1H2ADP20671 130 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 KCNA3P22001 575 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 PTENP60484 403 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF484Q5JVG2 852 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 TMEM154Q6P9G4 183 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 WDR49Q8IV35 697 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 EXD1Q8NHP7 514 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 HIST1H2AHQ96KK5 128 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 HIST1H2AJQ99878 128 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 H2AFJQ9BTM1 129 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 FRMD8Q9BZ67 464 aaPredicted RBP16.63■□□□□ 0.25
PTPN11-201ENST00000351677 NOD2Q9HC29 1040 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
PTPN11-201ENST00000351677 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 PRRG1O14668 218 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 FAM153BP0C7A2 387 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 BCL9O00512 1426 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 YY1P25490 414 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 DDX53Q86TM3 631 aaKnown RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 SPIRE2Q8WWL2 714 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 PAFAH2Q99487 392 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 LAMTOR4Q0VGL1 99 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 CYB5D1Q6P9G0 228 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 NLRP9Q7RTR0 991 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms