RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 RALAP11233 206 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PABPC1P11940 636 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PRKAA2P54646 552 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 NUDT18Q6ZVK8 323 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 TMPRSS6Q8IU80 811 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 FMR1NBQ8N0W7 255 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 BTBD10Q9BSF8 475 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 TJP2Q9UDY2 1190 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 BAIAP2Q9UQB8 552 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 S100GP29377 79 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PHKA2P46019 1235 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 BTN3A2P78410 334 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ATPAF2Q8N5M1 289 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 HPS3Q969F9 1004 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 C8orf4Q9NR00 106 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ZNF222Q9UK12 451 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SORBS3O60504 671 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PTGS2P35354 604 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CASP5P51878 434 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 DNAJC3Q13217 504 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MAPK6Q16659 721 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KYQ8NBH2 561 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 URGCPQ8TCY9 931 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 AFG1LQ8WV93 481 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CARD8Q9Y2G2 431 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ANXA6P08133 673 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 LARGE2Q8N3Y3 721 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CENPIQ92674 756 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MED15Q96RN5 788 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 TRPM5Q9NZQ8 1165 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KIAA0391O15091 583 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MYL4P12829 197 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 FDFT1P37268 417 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CHN2P52757 468 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KCTD2Q14681 263 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 NAB2Q15742 525 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PHKG1Q16816 387 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MTERF2Q49AM1 385 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MACC1Q6ZN28 852 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CCNJLQ8IV13 435 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 C11orf70Q9BRQ4 267 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 INTS2Q9H0H0 1204 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PCSK1NQ9UHG2 260 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KPNA5O15131 536 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ECE2O60344 883 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ATG7O95352 703 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CACNB1Q02641 598 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SLC29A2Q14542 456 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 FUT11Q495W5 492 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ESRP1Q6NXG1 681 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SLC22A9Q8IVM8 553 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 GUF1Q8N442 669 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SKA1Q96BD8 255 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PABPC3Q9H361 631 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 VTI1BQ9UEU0 232 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 HEATR9A2RTY3 570 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PCP4L1A6NKN8 68 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 VIL1P09327 827 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 ATP6V1C1P21283 382 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 HOXC9P31274 260 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 PRELPP51888 382 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SMCO1Q147U7 214 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 STILQ15468 1287 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 KRT24Q2M2I5 525 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 TYSND1Q2T9J0 566 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 POP5Q969H6 163 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 MRPL4Q9BYD3 311 aaKnown RBP8.64□□□□□ -1.03
MCPH1-201ENST00000344683 SPASTQ9UBP0 616 aa8.64□□□□□ -1.03
MCPH1-201ENST00000344683 CDHR2Q9BYE9 1310 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ABLIM1O14639 778 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RAD51CO43502 376 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 PDHBP11177 359 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 BTDP43251 543 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SLC15A2Q16348 729 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ABRAXAS1Q6UWZ7 409 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 KCTD1Q719H9 257 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 OR6Y1Q8NGX8 325 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 CLHC1Q8NHS4 586 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 EPB41L4BQ9H329 900 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 DSN1Q9H410 356 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 SAR1AQ9NR31 198 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 BNIP3LO60238 219 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 TSPAN19P0C672 248 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 RIPPLY1Q0D2K3 151 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 ITGA9Q13797 1035 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 DCAF4L1Q3SXM0 396 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 C5orf22Q49AR2 442 aa8.63□□□□□ -1.03
MCPH1-201ENST00000344683 FAM160B2Q86V87 743 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms