RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ACADSBP45954 432 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 USP10Q14694 798 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 PKN2Q16513 984 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.49□□□□□ -1.21
VCAN-202ENST00000342785 TTC39BQ5VTQ0 682 aaPredicted RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 ANKRD13AQ8IZ07 590 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 FAM172AQ8WUF8 416 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ATXN2LQ8WWM7 1075 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 SPON2Q9BUD6 331 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 MAGEB5Q9BZ81 275 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 DPP3Q9NY33 737 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 USP18Q9UMW8 372 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 RPS6KL1Q9Y6S9 549 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 A0A087WZ62 844 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 LOC102724159A0A0B4J2E5 919 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 EEF2KO00418 725 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 FSCN2O14926 492 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CD4P01730 458 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 S100BP04271 92 aaPredicted RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 LAMTOR4Q0VGL1 99 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 PWP2Q15269 919 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 UGP2Q16851 508 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 KIF19Q2TAC6 998 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CCDC33Q8N5R6 958 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.49□□□□□ -1.21
VCAN-202ENST00000342785 FDXACB1Q9BRP7 624 aaPredicted RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 ZSCAN5DPP0CG00 497 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 TGFB3P10600 412 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ELK3P41970 407 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 RAP1GAPP47736 663 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 PTK6Q13882 451 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ZACNQ401N2 412 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 C4orf22Q6V702 233 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 MTDHQ86UE4 582 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 FAM131BQ86XD5 332 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 C2orf69Q8N8R5 385 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 SHCBP1LQ9BZQ2 653 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 RASSF10A6NK89 507 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 AGPSO00116 658 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 SNX3O60493 162 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 NPTXRO95502 500 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 ANP32DO95626 131 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 FLT3P36888 993 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 PTGER2P43116 358 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CDH8P55286 799 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 YTHDF3Q7Z739 585 aaKnown RBP7.49□□□□□ -1.21
VCAN-202ENST00000342785 TMEM176AQ96HP8 235 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CENPKQ9BS16 269 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 LRRC19Q9H756 370 aa7.49□□□□□ -1.21
VCAN-202ENST00000342785 CYP1A2P05177 515 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 BMPR2Q13873 1038 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PDK2Q15119 407 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 AMHR2Q16671 573 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 FBXO16Q8IX29 292 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 CYP3A43Q9HB55 503 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TYW5A2RUC4 315 aaKnown RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 DFFAO00273 331 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ACKR2O00590 384 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 KLHL2O95198 593 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TRIP10Q15642 601 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 KATNAL2Q8IYT4 538 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 CNPY4Q8N129 248 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 LRRC57Q8N9N7 239 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 SLC7A14Q8TBB6 771 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TRAPPC12Q8WVT3 735 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PPP1R36Q96LQ0 422 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PCDHB18PQ96TA0 734 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 RXFP1Q9HBX9 757 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 L3MBTL1Q9Y468 752 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ASTN2O75129 1339 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 RNF103-CHMP3A0A140T963 221 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 M0R2N6 131 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 EPHB2P29323 1055 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 DNERQ8NFT8 737 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 KCNK16Q96T55 309 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 CTNNAL1Q9UBT7 734 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 CTSHP09668 335 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 EIF4BP23588 611 aaKnown RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 TAF6P49848 677 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ZNF268Q14587 947 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 NFIL3Q16649 462 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 VPS33BQ9H267 617 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 TASP1Q9H6P5 420 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PDE4DIPQ5VU43 2346 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 GNGT2O14610 69 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 LYPLA2O95372 231 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 APOEP02649 317 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 MYL2P10916 166 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 ADRA1DP25100 572 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 SLC26A2P50443 739 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 YWHAHQ04917 246 aaPredicted RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 MED21Q13503 144 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 KIZQ2M2Z5 673 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 PRPF39Q86UA1 669 aaKnown RBP7.48□□□□□ -1.21
VCAN-202ENST00000342785 GPRC5AQ8NFJ5 357 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 KREMEN1Q96MU8 473 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 SPATC1LQ9H0A9 340 aa7.48□□□□□ -1.21
VCAN-202ENST00000342785 C10orf88Q9H8K7 445 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms