RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 ZDHHC24Q6UX98 284 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 SPOCD1Q6ZMY3 1216 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 POLNQ7Z5Q5 900 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 SH3TC2Q8TF17 1288 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 WDR60Q8WVS4 1066 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 GFM2Q969S9 779 aaKnown RBP13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 STX18Q9P2W9 335 aaKnown RBP13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 NARFQ9UHQ1 456 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 TMEM131LA2VDJ0 1609 aa13.05□□□□□ -0.32
SSX2IP-201ENST00000342203 LIN7AO14910 233 aaPredicted RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 PSAPP07602 524 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 KBTBD12Q3ZCT8 623 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 KIAA2013Q8IYS2 634 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 GALNT15Q8N3T1 639 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 CCNFP41002 786 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 MRPS22P82650 360 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 TTC33Q6PID6 262 aaPredicted RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 USP6NLQ92738 828 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 ECSITQ9BQ95 431 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 MECRQ9BV79 373 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 NMUR2Q9GZQ4 415 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 BFARQ9NZS9 450 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 LYNP07948 512 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 NELFEP18615 380 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 SLC26A11Q86WA9 606 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 ARHGEF37A1IGU5 675 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 C2CD2LO14523 706 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 STRNO43815 780 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 TFE3P19532 575 aaPredicted RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 MLH1P40692 756 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 CLEC16AQ2KHT3 1053 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 OR6Y1Q8NGX8 325 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 LRRC19Q9H756 370 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
SSX2IP-201ENST00000342203 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 GALK1P51570 392 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 VCPP55072 806 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 GABPAQ06546 454 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 NFIAQ12857 509 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 GRIK5Q16478 980 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 COA1Q9GZY4 146 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 PEX11AO75192 247 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 VAV1P15498 845 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 PPP4CP60510 307 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 VSTM1Q6UX27 236 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 AJAP1Q9UKB5 411 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 SYCE1LA8MT33 242 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 APOL1O14791 398 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 PKNOX1P55347 436 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 BST1Q10588 318 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 NRF1Q16656 503 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 KDELC2Q7Z4H8 507 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 GPATCH2LQ9NWQ4 482 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 PDK3Q15120 406 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ZDHHC18Q9NUE0 388 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 MROH7Q68CQ1 1323 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 MT-CO1P00395 513 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
SSX2IP-201ENST00000342203 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms